Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
HADHAP40939 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 AC018628.1-201ENST00000624147 3819 ntBASIC6.43□□□□□ -1.38
HADHAP40939 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.43□□□□□ -1.38
HADHAP40939 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HADHAP40939 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HADHAP40939 HSPD1P8-201ENST00000400121 1658 ntBASIC6.42□□□□□ -1.38
HADHAP40939 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
HADHAP40939 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.42□□□□□ -1.38
HADHAP40939 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.42□□□□□ -1.38
HADHAP40939 MTHFD2P5-201ENST00000320415 844 ntBASIC6.42□□□□□ -1.38
HADHAP40939 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 OOSP1-201ENST00000398992 1270 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.42□□□□□ -1.38
HADHAP40939 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 UBE2V1P14-201ENST00000415815 558 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AC096644.3-201ENST00000416788 338 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AL157884.1-201ENST00000424561 454 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HADHAP40939 AC007386.1-201ENST00000455212 582 ntBASIC6.42□□□□□ -1.38
HADHAP40939 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
HADHAP40939 AC015524.1-201ENST00000491585 472 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AL117692.1-201ENST00000494283 713 ntBASIC6.42□□□□□ -1.38
HADHAP40939 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 SUMO2P4-201ENST00000504193 276 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.42□□□□□ -1.38
HADHAP40939 COX6B1P4-201ENST00000519826 484 ntBASIC6.42□□□□□ -1.38
HADHAP40939 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 MIR212-201ENST00000586026 110 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AL583832.1-201ENST00000603227 784 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AC090953.1-201ENST00000604305 1092 ntBASIC6.42□□□□□ -1.38
HADHAP40939 SNORA74.4-201ENST00000607595 199 ntBASIC6.42□□□□□ -1.38
HADHAP40939 AC010998.3-201ENST00000613871 631 ntBASIC6.42□□□□□ -1.38
HADHAP40939 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.42□□□□□ -1.38
HADHAP40939 SAMMSON-210ENST00000641260 1308 ntBASIC6.42□□□□□ -1.38
HADHAP40939 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HADHAP40939 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HADHAP40939 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.42□□□□□ -1.38
HADHAP40939 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HADHAP40939 AL353743.3-201ENST00000442109 1468 ntBASIC6.41□□□□□ -1.38
HADHAP40939 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
HADHAP40939 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HADHAP40939 AC005225.5-201ENST00000623547 2225 ntBASIC6.41□□□□□ -1.38
HADHAP40939 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HADHAP40939 AC092692.1-201ENST00000623625 2595 ntBASIC6.41□□□□□ -1.38
HADHAP40939 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.41□□□□□ -1.38
HADHAP40939 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HADHAP40939 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HADHAP40939 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HADHAP40939 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HADHAP40939 AC007068.1-201ENST00000396690 844 ntBASIC6.41□□□□□ -1.38
HADHAP40939 AL133260.1-201ENST00000405720 405 ntBASIC6.41□□□□□ -1.38
HADHAP40939 RN7SKP281-201ENST00000410472 352 ntBASIC6.41□□□□□ -1.38
HADHAP40939 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.41□□□□□ -1.38
HADHAP40939 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.41□□□□□ -1.38
HADHAP40939 OR6R1P-201ENST00000431838 940 ntBASIC6.41□□□□□ -1.38
HADHAP40939 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HADHAP40939 AC128677.1-201ENST00000436016 442 ntBASIC6.41□□□□□ -1.38
HADHAP40939 AC079922.1-201ENST00000443291 359 ntBASIC6.41□□□□□ -1.38
HADHAP40939 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.41□□□□□ -1.38
HADHAP40939 AC098818.1-201ENST00000478593 252 ntBASIC6.41□□□□□ -1.38
HADHAP40939 PPP1R11P1-201ENST00000486095 376 ntBASIC6.41□□□□□ -1.38
HADHAP40939 AC018645.1-201ENST00000505003 109 ntBASIC6.41□□□□□ -1.38
HADHAP40939 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.41□□□□□ -1.38
HADHAP40939 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.41□□□□□ -1.38
HADHAP40939 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.41□□□□□ -1.38
HADHAP40939 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.41□□□□□ -1.38
HADHAP40939 AL133399.1-201ENST00000527476 298 ntBASIC6.41□□□□□ -1.38
HADHAP40939 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HADHAP40939 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.41□□□□□ -1.38
HADHAP40939 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.41□□□□□ -1.38
HADHAP40939 MTND2P17-201ENST00000550281 688 ntBASIC6.41□□□□□ -1.38
HADHAP40939 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.41□□□□□ -1.38
HADHAP40939 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.41□□□□□ -1.38
HADHAP40939 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HADHAP40939 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.41□□□□□ -1.38
HADHAP40939 AL596275.2-207ENST00000641188 675 ntBASIC6.41□□□□□ -1.38
HADHAP40939 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms