Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FDFT1P37268 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.23□□□□□ -1.41
FDFT1P37268 AL360012.1-201ENST00000602813 131 ntBASIC6.23□□□□□ -1.41
FDFT1P37268 AP001823.1-201ENST00000604056 1003 ntBASIC6.23□□□□□ -1.41
FDFT1P37268 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.23□□□□□ -1.41
FDFT1P37268 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.23□□□□□ -1.41
FDFT1P37268 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FDFT1P37268 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
FDFT1P37268 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FDFT1P37268 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FDFT1P37268 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FDFT1P37268 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 AC022164.1-201ENST00000568767 2673 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 AL133260.1-201ENST00000405720 405 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 SNORA77.2-201ENST00000408571 112 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 RN7SKP166-201ENST00000410812 305 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 ARMC4P1-201ENST00000438905 707 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 AC092601.1-201ENST00000444526 383 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.22□□□□□ -1.41
FDFT1P37268 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.22□□□□□ -1.41
FDFT1P37268 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.22□□□□□ -1.41
FDFT1P37268 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC095052.1-201ENST00000509955 863 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.22□□□□□ -1.41
FDFT1P37268 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 AC005632.2-201ENST00000564271 828 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.22□□□□□ -1.41
FDFT1P37268 AC011891.2-201ENST00000604949 397 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 AC022001.1-201ENST00000605193 268 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.22□□□□□ -1.41
FDFT1P37268 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
FDFT1P37268 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.22□□□□□ -1.41
FDFT1P37268 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FDFT1P37268 AL592429.1-201ENST00000403909 1473 ntBASIC6.22□□□□□ -1.41
FDFT1P37268 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
FDFT1P37268 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
FDFT1P37268 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
FDFT1P37268 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
FDFT1P37268 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.21□□□□□ -1.41
FDFT1P37268 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
FDFT1P37268 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.21□□□□□ -1.41
FDFT1P37268 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
FDFT1P37268 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.21□□□□□ -1.41
FDFT1P37268 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
FDFT1P37268 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.21□□□□□ -1.42
FDFT1P37268 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
FDFT1P37268 RNA5SP375-201ENST00000362975 119 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 RNU105B-201ENST00000364478 208 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
FDFT1P37268 PSMA6P1-201ENST00000400275 741 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
FDFT1P37268 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.21□□□□□ -1.42
FDFT1P37268 RPS15AP30-201ENST00000420976 390 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
FDFT1P37268 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.21□□□□□ -1.42
FDFT1P37268 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.21□□□□□ -1.42
FDFT1P37268 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.21□□□□□ -1.42
FDFT1P37268 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.21□□□□□ -1.42
FDFT1P37268 AC138517.1-201ENST00000515724 568 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 RNA5SP434-201ENST00000516647 121 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 CASP1P2-201ENST00000526830 1258 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.21□□□□□ -1.42
FDFT1P37268 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.21□□□□□ -1.42
FDFT1P37268 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.21□□□□□ -1.42
FDFT1P37268 AC093388.1-201ENST00000609166 430 ntBASIC6.21□□□□□ -1.42
FDFT1P37268 AL136097.3-201ENST00000611097 505 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms