Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL020997.1-201ENST00000446554 349 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC009963.4-201ENST00000448535 339 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.18□□□□□ -1.42
PCNAP12004 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.18□□□□□ -1.42
PCNAP12004 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 TRBV8-1-201ENST00000481590 279 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC106800.3-201ENST00000511389 308 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC093664.1-201ENST00000511779 289 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.18□□□□□ -1.42
PCNAP12004 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 IGKV1D-22-201ENST00000518953 324 ntBASIC6.18□□□□□ -1.42
PCNAP12004 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 AC011270.1-201ENST00000558606 583 ntBASIC6.18□□□□□ -1.42
PCNAP12004 HMGN1P26-201ENST00000558737 303 ntBASIC6.18□□□□□ -1.42
PCNAP12004 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 AC009268.1-201ENST00000561352 1203 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 MIR4732-201ENST00000581873 76 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.18□□□□□ -1.42
PCNAP12004 AC004805.3-201ENST00000603178 310 ntBASIC6.18□□□□□ -1.42
PCNAP12004 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.18□□□□□ -1.42
PCNAP12004 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.18□□□□□ -1.42
PCNAP12004 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.18□□□□□ -1.42
PCNAP12004 AL136370.1-201ENST00000608166 691 ntBASIC6.18□□□□□ -1.42
PCNAP12004 AC006213.4-201ENST00000616184 634 ntBASIC6.18□□□□□ -1.42
PCNAP12004 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 MTCO1P7-201ENST00000419523 1542 ntBASIC6.18□□□□□ -1.42
PCNAP12004 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCNAP12004 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCNAP12004 AC011369.2-201ENST00000624423 1567 ntBASIC6.18□□□□□ -1.42
PCNAP12004 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCNAP12004 AC005261.6-201ENST00000623072 1387 ntBASIC6.18□□□□□ -1.42
PCNAP12004 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.17□□□□□ -1.42
PCNAP12004 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PCNAP12004 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCNAP12004 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCNAP12004 RNA5SP478-201ENST00000364657 115 ntBASIC6.17□□□□□ -1.42
PCNAP12004 RNU1-84P-201ENST00000365447 164 ntBASIC6.17□□□□□ -1.42
PCNAP12004 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 U3.43-201ENST00000410734 213 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AC116036.1-201ENST00000412199 367 ntBASIC6.17□□□□□ -1.42
PCNAP12004 REREP1Y-201ENST00000422655 198 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AL157884.1-201ENST00000424561 454 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AC106901.1-201ENST00000425086 698 ntBASIC6.17□□□□□ -1.42
PCNAP12004 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 REREP2Y-201ENST00000439103 200 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AC114878.1-201ENST00000441166 358 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 OR6C72P-201ENST00000451403 892 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 SNX18P26-201ENST00000458433 740 ntBASIC6.17□□□□□ -1.42
PCNAP12004 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.17□□□□□ -1.42
PCNAP12004 AC022730.1-201ENST00000473114 568 ntBASIC6.17□□□□□ -1.42
PCNAP12004 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 AC021146.10-201ENST00000515628 706 ntBASIC6.17□□□□□ -1.42
PCNAP12004 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.17□□□□□ -1.42
PCNAP12004 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.17□□□□□ -1.42
PCNAP12004 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 AC084851.2-201ENST00000530377 364 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 AC090616.1-201ENST00000583895 447 ntBASIC6.17□□□□□ -1.42
PCNAP12004 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.17□□□□□ -1.42
PCNAP12004 AC068213.1-201ENST00000625124 226 ntBASIC6.17□□□□□ -1.42
PCNAP12004 LINC02495-203ENST00000636704 242 ntBASIC6.17□□□□□ -1.42
PCNAP12004 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCNAP12004 LINC02019-201ENST00000608605 2060 ntBASIC6.17□□□□□ -1.42
PCNAP12004 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCNAP12004 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
PCNAP12004 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCNAP12004 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.17□□□□□ -1.42
PCNAP12004 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms