Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC114774.1-201ENST00000507410 1770 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC068870.3-201ENST00000625077 2536 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLPTM1O96005 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 GAPDHP57-201ENST00000424400 585 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 ETF1P1-206ENST00000427296 984 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 RPS27AP6-201ENST00000427962 448 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AL590128.1-201ENST00000433407 286 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AC013403.1-201ENST00000436954 263 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 PPIAP32-201ENST00000449940 472 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC063955.1-201ENST00000462872 685 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC022415.1-202ENST00000486612 523 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.85□□□□□ -1.47
CLPTM1O96005 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC131935.1-201ENST00000524621 333 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 OR8Q1P-201ENST00000526467 655 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC140063.1-201ENST00000541343 259 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.85□□□□□ -1.47
CLPTM1O96005 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.85□□□□□ -1.47
CLPTM1O96005 MIR6849-201ENST00000618543 69 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 AC106782.7-201ENST00000624024 418 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AC018692.2-201ENST00000624130 348 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AC133555.5-201ENST00000624430 418 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 AC096921.2-201ENST00000561507 1916 ntBASIC5.85□□□□□ -1.47
CLPTM1O96005 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CLPTM1O96005 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.85□□□□□ -1.47
CLPTM1O96005 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLPTM1O96005 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC007842.1-201ENST00000597336 2039 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC007342.9-201ENST00000623877 1385 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 RN7SKP191-201ENST00000364713 306 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC092634.1-201ENST00000366505 199 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 RNU11-6P-201ENST00000391127 133 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC006509.1-201ENST00000420788 634 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC003989.1-201ENST00000434569 565 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.84□□□□□ -1.47
CLPTM1O96005 RN7SL70P-201ENST00000478322 302 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC093878.1-201ENST00000515630 432 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.84□□□□□ -1.47
CLPTM1O96005 MIR3189-201ENST00000578735 73 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC107993.1-201ENST00000591343 684 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC006328.2-201ENST00000623198 397 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC012005.2-201ENST00000624333 397 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC138627.1-204ENST00000641894 765 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 AC079776.5-201ENST00000641920 211 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 OR7E91P-202ENST00000642062 1198 ntBASIC5.84□□□□□ -1.47
CLPTM1O96005 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.84□□□□□ -1.47
CLPTM1O96005 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.84□□□□□ -1.47
CLPTM1O96005 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms