Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 AC010998.3-201ENST00000613871 631 ntBASIC5.93□□□□□ -1.46
SNX3O60493 MIR6133-201ENST00000617057 108 ntBASIC5.93□□□□□ -1.46
SNX3O60493 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX3O60493 AC027559.1-201ENST00000636288 271 ntBASIC5.93□□□□□ -1.46
SNX3O60493 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX3O60493 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX3O60493 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 BCORP1-203ENST00000513194 5093 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX3O60493 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 MAPK10-338ENST00000641647 3362 ntBASIC5.92□□□□□ -1.46
SNX3O60493 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.92□□□□□ -1.46
SNX3O60493 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.92□□□□□ -1.46
SNX3O60493 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SNX3O60493 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 RNU1-49P-201ENST00000363468 159 ntBASIC5.92□□□□□ -1.46
SNX3O60493 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 RPL11P3-201ENST00000395256 523 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AL662791.3-201ENST00000413771 776 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX3O60493 AHCYP8-201ENST00000425108 209 ntBASIC5.92□□□□□ -1.46
SNX3O60493 CRIP1P1-201ENST00000427567 185 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AC096632.2-201ENST00000438139 1239 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX3O60493 AL512593.1-201ENST00000444758 779 ntBASIC5.92□□□□□ -1.46
SNX3O60493 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX3O60493 RN7SL326P-201ENST00000477493 296 ntBASIC5.92□□□□□ -1.46
SNX3O60493 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 SCARNA11.1-201ENST00000516918 132 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AC138832.1-201ENST00000522871 556 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AP006437.1-202ENST00000530327 933 ntBASIC5.92□□□□□ -1.46
SNX3O60493 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SNX3O60493 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SNX3O60493 AL132640.2-202ENST00000559732 614 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX3O60493 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX3O60493 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.92□□□□□ -1.46
SNX3O60493 AL513327.3-201ENST00000602618 469 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX3O60493 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SNX3O60493 MIR6732-201ENST00000619365 60 ntBASIC5.92□□□□□ -1.46
SNX3O60493 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX3O60493 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX3O60493 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.92□□□□□ -1.46
SNX3O60493 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX3O60493 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SNX3O60493 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX3O60493 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX3O60493 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.92□□□□□ -1.46
SNX3O60493 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX3O60493 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 AC010401.2-201ENST00000575137 4934 ntBASIC5.91□□□□□ -1.46
SNX3O60493 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.91□□□□□ -1.46
SNX3O60493 RN7SKP121-201ENST00000410842 305 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AC091492.1-201ENST00000419844 272 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 SUMO2P8-201ENST00000434672 286 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AL157385.1-201ENST00000446973 268 ntBASIC5.91□□□□□ -1.46
SNX3O60493 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 ST13P21-201ENST00000453250 1098 ntBASIC5.91□□□□□ -1.46
SNX3O60493 SDC4P-201ENST00000453285 601 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 AC117500.1-201ENST00000497352 755 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 AC018645.1-201ENST00000505003 109 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 RN7SKP196-201ENST00000516267 345 ntBASIC5.91□□□□□ -1.46
SNX3O60493 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SNX3O60493 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.91□□□□□ -1.46
SNX3O60493 AL121594.2-201ENST00000541658 472 ntBASIC5.91□□□□□ -1.46
SNX3O60493 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX3O60493 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.91□□□□□ -1.46
SNX3O60493 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX3O60493 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SNX3O60493 AC133552.4-201ENST00000576103 676 ntBASIC5.91□□□□□ -1.46
SNX3O60493 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.91□□□□□ -1.46
SNX3O60493 PRR13P3-201ENST00000603578 376 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AC008555.7-201ENST00000605008 583 ntBASIC5.91□□□□□ -1.46
SNX3O60493 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.91□□□□□ -1.46
SNX3O60493 AC010320.5-201ENST00000619124 676 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms