Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.69□□□□□ -1.5
ZIC3O60481 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZIC3O60481 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC010168.2-201ENST00000562691 5428 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ZIC3O60481 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 RNA5SP346-201ENST00000363541 121 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 RN7SKP237-201ENST00000364663 301 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AL358178.1-201ENST00000407698 397 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 EEF1B2P8-201ENST00000414101 671 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 RPL12P43-201ENST00000420608 499 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AC013410.2-201ENST00000422627 201 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AL445528.1-201ENST00000426330 420 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 RPSAP65-201ENST00000429660 595 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 AL392003.1-201ENST00000434394 243 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 AL606490.8-201ENST00000441624 319 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 HMGB1P7-201ENST00000450921 612 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 HIGD1AP16-201ENST00000450986 258 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 RPL34P33-201ENST00000486062 334 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AC122718.2-201ENST00000505325 591 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC108103.1-201ENST00000511286 446 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC117525.1-201ENST00000515228 503 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC107958.1-201ENST00000556576 290 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.68□□□□□ -1.5
ZIC3O60481 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC124916.2-201ENST00000604416 224 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AC006924.1-201ENST00000610750 559 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AL080312.2-201ENST00000613001 630 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 MIR7109-201ENST00000613748 65 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 AL590410.1-201ENST00000617925 333 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ZIC3O60481 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 AC010401.2-201ENST00000575137 4934 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 BIN2P1-201ENST00000504996 1530 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 AC078880.4-201ENST00000617627 1749 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 AC112243.1-201ENST00000623949 3851 ntBASIC5.68□□□□□ -1.5
ZIC3O60481 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZIC3O60481 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ZIC3O60481 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.67□□□□□ -1.5
ZIC3O60481 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ZIC3O60481 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ZIC3O60481 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZIC3O60481 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.67□□□□□ -1.5
ZIC3O60481 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZIC3O60481 OR2AH1P-202ENST00000641232 2744 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 AL391261.1-201ENST00000555712 1479 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ZIC3O60481 GCNT1P4-201ENST00000404096 329 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 UBE2V1P15-201ENST00000407776 448 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 UBE2V1P14-201ENST00000415815 558 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.67□□□□□ -1.5
ZIC3O60481 RPL7AP14-201ENST00000424041 802 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 AL354707.3-201ENST00000427308 331 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ZIC3O60481 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.67□□□□□ -1.5
ZIC3O60481 PPIAP10-201ENST00000438675 458 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.67□□□□□ -1.5
ZIC3O60481 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.67□□□□□ -1.5
ZIC3O60481 AC009237.1-201ENST00000442127 744 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 RPSAP40-201ENST00000442343 891 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.67□□□□□ -1.5
ZIC3O60481 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.67□□□□□ -1.5
ZIC3O60481 MORF4L1P4-201ENST00000450245 976 ntBASIC5.67□□□□□ -1.5
ZIC3O60481 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.67□□□□□ -1.5
ZIC3O60481 RN7SL254P-201ENST00000460609 284 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms