Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chd1lQ9CXF7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Gm7291-201ENSMUST00000199147 382 ntBASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chd1lQ9CXF7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chd1lQ9CXF7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chd1lQ9CXF7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chd1lQ9CXF7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chd1lQ9CXF7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms