Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL512408.1-201ENST00000569378 2000 ntBASIC21.07■□□□□ 0.96
BRCC3P46736 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
BRCC3P46736 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.07■□□□□ 0.96
BRCC3P46736 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRCC3P46736 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRCC3P46736 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRCC3P46736 YBX1P10-201ENST00000444752 975 ntBASIC21.07■□□□□ 0.96
BRCC3P46736 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRCC3P46736 NUDT16P1-203ENST00000513809 620 ntBASIC21.07■□□□□ 0.96
BRCC3P46736 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.07■□□□□ 0.96
BRCC3P46736 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRCC3P46736 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.07■□□□□ 0.96
BRCC3P46736 C1QL1P1-201ENST00000568105 661 ntBASIC21.07■□□□□ 0.96
BRCC3P46736 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.07■□□□□ 0.96
BRCC3P46736 AC133561.5-201ENST00000635547 218 ntBASIC21.07■□□□□ 0.96
BRCC3P46736 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.07■□□□□ 0.96
BRCC3P46736 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRCC3P46736 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
BRCC3P46736 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.06■□□□□ 0.96
BRCC3P46736 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
BRCC3P46736 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
BRCC3P46736 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
BRCC3P46736 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 KSR1P1-201ENST00000446298 240 ntBASIC21.06■□□□□ 0.96
BRCC3P46736 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.06■□□□□ 0.96
BRCC3P46736 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.06■□□□□ 0.96
BRCC3P46736 REXO1L10P-201ENST00000615707 1290 ntBASIC21.06■□□□□ 0.96
BRCC3P46736 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.06■□□□□ 0.96
BRCC3P46736 AP005212.1-201ENST00000581547 1997 ntBASIC21.06■□□□□ 0.96
BRCC3P46736 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
BRCC3P46736 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
BRCC3P46736 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRCC3P46736 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
BRCC3P46736 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.05■□□□□ 0.96
BRCC3P46736 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.05■□□□□ 0.96
BRCC3P46736 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.05■□□□□ 0.96
BRCC3P46736 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.05■□□□□ 0.96
BRCC3P46736 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 KRT18P16-201ENST00000510337 1294 ntBASIC21.05■□□□□ 0.96
BRCC3P46736 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.05■□□□□ 0.96
BRCC3P46736 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.05■□□□□ 0.96
BRCC3P46736 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.05■□□□□ 0.96
BRCC3P46736 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 AL391422.3-201ENST00000603791 2761 ntBASIC21.05■□□□□ 0.96
BRCC3P46736 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRCC3P46736 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.04■□□□□ 0.96
BRCC3P46736 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.04■□□□□ 0.96
BRCC3P46736 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.04■□□□□ 0.96
BRCC3P46736 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.04■□□□□ 0.96
BRCC3P46736 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.04■□□□□ 0.96
BRCC3P46736 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.04■□□□□ 0.96
BRCC3P46736 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 LINC01023-201ENST00000606054 436 ntBASIC21.04■□□□□ 0.96
BRCC3P46736 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 FEM1AP1-201ENST00000431297 1995 ntBASIC21.04■□□□□ 0.96
BRCC3P46736 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.04■□□□□ 0.96
BRCC3P46736 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.04■□□□□ 0.96
BRCC3P46736 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
BRCC3P46736 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BRCC3P46736 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
BRCC3P46736 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.04■□□□□ 0.96
BRCC3P46736 KRT16P1-201ENST00000399124 1418 ntBASIC21.04■□□□□ 0.96
BRCC3P46736 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRCC3P46736 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.03■□□□□ 0.96
BRCC3P46736 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRCC3P46736 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRCC3P46736 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.03■□□□□ 0.96
BRCC3P46736 TUBB8P6-201ENST00000436895 1288 ntBASIC21.03■□□□□ 0.96
BRCC3P46736 RBM17P1-201ENST00000453646 1190 ntBASIC21.03■□□□□ 0.96
BRCC3P46736 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.03■□□□□ 0.96
BRCC3P46736 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
BRCC3P46736 AC092667.1-201ENST00000434301 2586 ntBASIC21.03■□□□□ 0.96
BRCC3P46736 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms