Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.59■□□□□ 0.57
Sox5P35710 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Sox5P35710 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.59■□□□□ 0.57
Sox5P35710 Gm37292-201ENSMUST00000192062 758 ntBASIC18.59■□□□□ 0.57
Sox5P35710 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Sox5P35710 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox5P35710 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Sox5P35710 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox5P35710 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox5P35710 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox5P35710 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.58■□□□□ 0.56
Sox5P35710 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Sox5P35710 Gm27275-201ENSMUST00000184318 272 ntBASIC18.58■□□□□ 0.56
Sox5P35710 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox5P35710 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox5P35710 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox5P35710 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox5P35710 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Sox5P35710 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sox5P35710 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sox5P35710 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Sox5P35710 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Sox5P35710 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox5P35710 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.57■□□□□ 0.56
Sox5P35710 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
Sox5P35710 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sox5P35710 Gm24841-201ENSMUST00000158676 357 ntBASIC18.56■□□□□ 0.56
Sox5P35710 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.56■□□□□ 0.56
Sox5P35710 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox5P35710 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.55■□□□□ 0.56
Sox5P35710 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Sox5P35710 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.55■□□□□ 0.56
Sox5P35710 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sox5P35710 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Gm10517-202ENSMUST00000192970 758 ntBASIC18.55■□□□□ 0.56
Sox5P35710 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox5P35710 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sox5P35710 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sox5P35710 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sox5P35710 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sox5P35710 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms