Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.22■□□□□ 0.99
CD58P19256 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CD58P19256 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.21■□□□□ 0.99
CD58P19256 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.21■□□□□ 0.99
CD58P19256 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.21■□□□□ 0.99
CD58P19256 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.21■□□□□ 0.99
CD58P19256 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.21■□□□□ 0.99
CD58P19256 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.21■□□□□ 0.99
CD58P19256 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CD58P19256 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.21■□□□□ 0.99
CD58P19256 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CD58P19256 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CD58P19256 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CD58P19256 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CD58P19256 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CD58P19256 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 POM121L13P-201ENST00000422362 380 ntBASIC21.2■□□□□ 0.98
CD58P19256 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.2■□□□□ 0.98
CD58P19256 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.2■□□□□ 0.98
CD58P19256 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.2■□□□□ 0.98
CD58P19256 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.2■□□□□ 0.98
CD58P19256 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.2■□□□□ 0.98
CD58P19256 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.2■□□□□ 0.98
CD58P19256 AC233263.1-201ENST00000578059 224 ntBASIC21.2■□□□□ 0.98
CD58P19256 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.2■□□□□ 0.98
CD58P19256 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.2■□□□□ 0.98
CD58P19256 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD58P19256 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CD58P19256 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CD58P19256 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.19■□□□□ 0.98
CD58P19256 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.19■□□□□ 0.98
CD58P19256 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD58P19256 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.19■□□□□ 0.98
CD58P19256 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 POU5F1P3-201ENST00000428824 1078 ntBASIC21.19■□□□□ 0.98
CD58P19256 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.19■□□□□ 0.98
CD58P19256 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD58P19256 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 AC006058.3-201ENST00000606217 1069 ntBASIC21.19■□□□□ 0.98
CD58P19256 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.19■□□□□ 0.98
CD58P19256 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.19■□□□□ 0.98
CD58P19256 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.19■□□□□ 0.98
CD58P19256 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.19■□□□□ 0.98
CD58P19256 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CD58P19256 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD58P19256 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.19■□□□□ 0.98
CD58P19256 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.19■□□□□ 0.98
CD58P19256 AC018553.1-201ENST00000616682 1458 ntBASIC21.19■□□□□ 0.98
CD58P19256 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD58P19256 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD58P19256 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CD58P19256 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD58P19256 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD58P19256 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CD58P19256 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.18■□□□□ 0.98
CD58P19256 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CD58P19256 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.18■□□□□ 0.98
CD58P19256 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD58P19256 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD58P19256 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.17■□□□□ 0.98
CD58P19256 FAM201B-201ENST00000458407 597 ntBASIC21.17■□□□□ 0.98
CD58P19256 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.17■□□□□ 0.98
CD58P19256 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.17■□□□□ 0.98
CD58P19256 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.17■□□□□ 0.98
CD58P19256 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD58P19256 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms