Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC4O75487 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.76■□□□□ 0.75
GPC4O75487 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.76■□□□□ 0.75
GPC4O75487 AC098934.4-201ENST00000564127 592 ntBASIC19.76■□□□□ 0.75
GPC4O75487 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
GPC4O75487 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
GPC4O75487 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 TCF3P1-201ENST00000423021 1937 ntBASIC19.76■□□□□ 0.75
GPC4O75487 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
GPC4O75487 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.76■□□□□ 0.75
GPC4O75487 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GPC4O75487 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
GPC4O75487 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC4O75487 AC069152.1-201ENST00000438030 544 ntBASIC19.75■□□□□ 0.75
GPC4O75487 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.75■□□□□ 0.75
GPC4O75487 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC4O75487 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.75■□□□□ 0.75
GPC4O75487 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC4O75487 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.75■□□□□ 0.75
GPC4O75487 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GPC4O75487 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC4O75487 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC4O75487 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GPC4O75487 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
GPC4O75487 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.74■□□□□ 0.75
GPC4O75487 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.74■□□□□ 0.75
GPC4O75487 AC133041.1-202ENST00000642053 222 ntBASIC19.74■□□□□ 0.75
GPC4O75487 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
GPC4O75487 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.74■□□□□ 0.75
GPC4O75487 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
GPC4O75487 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
GPC4O75487 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC4O75487 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
GPC4O75487 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC4O75487 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GPC4O75487 AC097658.1-201ENST00000475555 843 ntBASIC19.73■□□□□ 0.75
GPC4O75487 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
GPC4O75487 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.73■□□□□ 0.75
GPC4O75487 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.73■□□□□ 0.75
GPC4O75487 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GPC4O75487 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
GPC4O75487 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
GPC4O75487 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.73■□□□□ 0.75
GPC4O75487 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC4O75487 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC4O75487 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC4O75487 AL355802.2-201ENST00000402069 882 ntBASIC19.72■□□□□ 0.75
GPC4O75487 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.72■□□□□ 0.75
GPC4O75487 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.72■□□□□ 0.75
GPC4O75487 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC4O75487 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.72■□□□□ 0.75
GPC4O75487 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.72■□□□□ 0.75
GPC4O75487 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GPC4O75487 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.72■□□□□ 0.75
GPC4O75487 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
GPC4O75487 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC4O75487 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GPC4O75487 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.72■□□□□ 0.75
GPC4O75487 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GPC4O75487 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC4O75487 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
GPC4O75487 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC4O75487 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
GPC4O75487 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms