Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.33■□□□□ 0.85
DFFAO00273 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.33■□□□□ 0.85
DFFAO00273 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
DFFAO00273 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DFFAO00273 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.33■□□□□ 0.85
DFFAO00273 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
DFFAO00273 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.33■□□□□ 0.84
DFFAO00273 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DFFAO00273 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.33■□□□□ 0.84
DFFAO00273 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
DFFAO00273 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
DFFAO00273 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DFFAO00273 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
DFFAO00273 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.32■□□□□ 0.84
DFFAO00273 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.32■□□□□ 0.84
DFFAO00273 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.32■□□□□ 0.84
DFFAO00273 AC120498.8-201ENST00000614275 531 ntBASIC20.32■□□□□ 0.84
DFFAO00273 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
DFFAO00273 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.32■□□□□ 0.84
DFFAO00273 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.32■□□□□ 0.84
DFFAO00273 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.32■□□□□ 0.84
DFFAO00273 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DFFAO00273 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DFFAO00273 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DFFAO00273 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DFFAO00273 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DFFAO00273 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DFFAO00273 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DFFAO00273 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DFFAO00273 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.31■□□□□ 0.84
DFFAO00273 AP003097.1-201ENST00000530657 1135 ntBASIC20.31■□□□□ 0.84
DFFAO00273 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.31■□□□□ 0.84
DFFAO00273 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.31■□□□□ 0.84
DFFAO00273 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DFFAO00273 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DFFAO00273 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DFFAO00273 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.3■□□□□ 0.84
DFFAO00273 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
DFFAO00273 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DFFAO00273 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.3■□□□□ 0.84
DFFAO00273 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.3■□□□□ 0.84
DFFAO00273 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.3■□□□□ 0.84
DFFAO00273 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.3■□□□□ 0.84
DFFAO00273 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.3■□□□□ 0.84
DFFAO00273 AC008403.3-201ENST00000598924 454 ntBASIC20.3■□□□□ 0.84
DFFAO00273 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.3■□□□□ 0.84
DFFAO00273 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DFFAO00273 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.3■□□□□ 0.84
DFFAO00273 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.3■□□□□ 0.84
DFFAO00273 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DFFAO00273 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
DFFAO00273 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DFFAO00273 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
DFFAO00273 AC018553.1-201ENST00000616682 1458 ntBASIC20.3■□□□□ 0.84
DFFAO00273 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DFFAO00273 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.3■□□□□ 0.84
DFFAO00273 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.29■□□□□ 0.84
DFFAO00273 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DFFAO00273 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DFFAO00273 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.29■□□□□ 0.84
DFFAO00273 TMEM179-206ENST00000616017 1645 ntBASIC20.29■□□□□ 0.84
DFFAO00273 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
DFFAO00273 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.29■□□□□ 0.84
DFFAO00273 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.29■□□□□ 0.84
DFFAO00273 MIR4651-201ENST00000582622 73 ntBASIC20.29■□□□□ 0.84
DFFAO00273 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.29■□□□□ 0.84
DFFAO00273 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.29■□□□□ 0.84
DFFAO00273 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.29■□□□□ 0.84
DFFAO00273 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.29■□□□□ 0.84
DFFAO00273 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.29■□□□□ 0.84
DFFAO00273 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DFFAO00273 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.28■□□□□ 0.84
DFFAO00273 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
DFFAO00273 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.28■□□□□ 0.84
DFFAO00273 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.28■□□□□ 0.84
DFFAO00273 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DFFAO00273 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.28■□□□□ 0.84
DFFAO00273 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
DFFAO00273 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DFFAO00273 ESRRAP1-201ENST00000400596 1257 ntBASIC20.28■□□□□ 0.84
DFFAO00273 AC026366.1-201ENST00000488803 879 ntBASIC20.28■□□□□ 0.84
DFFAO00273 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DFFAO00273 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms