Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 AL627171.1-201ENST00000618845 1308 ntBASIC7.51□□□□□ -1.21
CTDP1Q9Y5B0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC009237.3-203ENST00000442128 3551 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 RAD17P2-201ENST00000451754 1977 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 CASC19-246ENST00000641625 1606 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 MT-RNR1-201ENST00000389680 954 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 OR7E156P-201ENST00000400303 464 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 MIR1282-201ENST00000408865 101 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 RNF2P1-201ENST00000442955 1010 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 HMGB1P7-201ENST00000450921 612 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 RN7SL834P-201ENST00000461450 286 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AP002453.1-201ENST00000492327 668 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC091874.2-201ENST00000505889 720 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 HSD3BP3-201ENST00000514706 994 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 RNU4-18P-201ENST00000516751 149 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 SCARNA1-201ENST00000517138 166 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC008055.1-201ENST00000547032 609 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AP002345.2-201ENST00000609961 904 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC084824.5-201ENST00000612009 413 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AP001264.1-201ENST00000620602 703 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC091046.2-201ENST00000620775 665 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC025262.3-201ENST00000623666 360 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AC068446.1-201ENST00000556425 1549 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 CASC19-228ENST00000641414 1684 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.5□□□□□ -1.21
CTDP1Q9Y5B0 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AL136531.3-201ENST00000624378 3658 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 RNA5SP433-201ENST00000364491 114 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 RNU1-46P-201ENST00000384425 164 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 RNA5SP431-201ENST00000410312 120 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC092865.3-201ENST00000425390 1026 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 KCTD9P1-201ENST00000430462 1167 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 RPL12P11-201ENST00000439970 501 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AL645936.1-201ENST00000441979 518 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 CXCR2P1-202ENST00000443392 1074 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 POU5F1P5-201ENST00000445059 658 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC098826.2-201ENST00000452011 651 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 TVP23BP2-201ENST00000455082 615 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC026407.1-201ENST00000518369 204 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AL133399.1-201ENST00000527476 298 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC023158.1-201ENST00000561632 1025 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC002519.2-203ENST00000567043 837 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 RPSAP75-201ENST00000605848 301 ntBASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.49□□□□□ -1.21
CTDP1Q9Y5B0 SNORA74.4-201ENST00000607595 199 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms