Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 GPN3P1-201ENST00000423883 535 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 OSTCP4-201ENST00000424397 449 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AC092646.1-201ENST00000427142 901 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 OR6R1P-201ENST00000431838 940 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 HIGD1AP16-201ENST00000450986 258 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 ACA64.4-201ENST00000459070 127 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 RN7SL39P-201ENST00000462264 297 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 RN7SL790P-201ENST00000474043 298 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 snoU109.5-201ENST00000516231 132 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AC135983.3-201ENST00000528049 1226 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AP004607.5-201ENST00000532034 217 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AP000619.2-201ENST00000546014 969 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AL589765.6-201ENST00000601909 549 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AC097641.3-201ENST00000613523 464 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 CASC19-246ENST00000641625 1606 ntBASIC5.73□□□□□ -1.49
VAPAQ9P0L0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAPAQ9P0L0 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 MIR1266-201ENST00000408125 84 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 OR52N3P-201ENST00000413417 934 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 NPM1P23-201ENST00000440193 849 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 CXCR2P1-202ENST00000443392 1074 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 POU5F1P5-201ENST00000445059 658 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 RPL5P10-201ENST00000445207 894 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 RPL31P11-202ENST00000454082 372 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC063955.1-201ENST00000462872 685 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 RN7SL104P-201ENST00000498686 293 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC037479.1-201ENST00000558361 625 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 HMGN2P47-201ENST00000559378 272 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 MRPL45P2-203ENST00000573318 473 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC119403.2-201ENST00000590960 598 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC036176.3-201ENST00000602456 418 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 MIR6503-201ENST00000622884 86 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 EIF3EP1-201ENST00000433978 1316 ntBASIC5.72□□□□□ -1.49
VAPAQ9P0L0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAPAQ9P0L0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VAPAQ9P0L0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VAPAQ9P0L0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms