Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC092266.1-201ENST00000610958 165 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC079414.3-201ENST00000612986 1090 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC018659.2-201ENST00000624690 715 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AL731532.1-201ENST00000623972 4236 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CISHQ9NSE2 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CISHQ9NSE2 AL117378.2-201ENST00000622916 1337 ntBASIC6.46□□□□□ -1.38
CISHQ9NSE2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.46□□□□□ -1.38
CISHQ9NSE2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CISHQ9NSE2 PSG10P-201ENST00000501199 1500 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CISHQ9NSE2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CISHQ9NSE2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CISHQ9NSE2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CISHQ9NSE2 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 SNORA77.2-201ENST00000408571 112 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 RN7SKP166-201ENST00000410812 305 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AL445687.2-201ENST00000458156 728 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC124945.1-201ENST00000485133 188 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 RPL37P23-201ENST00000492641 294 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 CCDC11P1-201ENST00000503137 1162 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 PRMT5P1-201ENST00000514351 598 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC002310.3-201ENST00000569728 723 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 AC073593.1-201ENST00000624500 411 ntBASIC6.45□□□□□ -1.38
CISHQ9NSE2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CISHQ9NSE2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CISHQ9NSE2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC093225.1-201ENST00000506867 1408 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 COX6B1P3-201ENST00000312310 260 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC107977.1-201ENST00000355745 939 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AL121835.1-201ENST00000404250 354 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 RN7SL170P-201ENST00000487098 295 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC083795.1-201ENST00000491760 320 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 RBBP4P1-201ENST00000502424 1276 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC107958.1-201ENST00000556576 290 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 AP005119.1-201ENST00000580956 292 ntBASIC6.44□□□□□ -1.38
CISHQ9NSE2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.44□□□□□ -1.38
CISHQ9NSE2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CISHQ9NSE2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.43□□□□□ -1.38
CISHQ9NSE2 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CISHQ9NSE2 ZNF812P-201ENST00000457674 1694 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms