Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 RNU4-40P-201ENST00000364351 143 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 TMA16P2-201ENST00000413187 601 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC023512.1-201ENST00000444513 499 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL845321.1-201ENST00000444603 348 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL096803.1-201ENST00000456921 1021 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 RN7SL492P-201ENST00000460700 295 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 RPS26P11-201ENST00000463445 348 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 RPS26P6-201ENST00000475156 348 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 RPS14P8-201ENST00000478778 369 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 RPL21P131-201ENST00000497298 483 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 GOLGA5P1-201ENST00000507317 980 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC096661.1-201ENST00000515870 822 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 EEF1B2P2-201ENST00000519625 676 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 OR4U1P-201ENST00000554958 912 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 BNIP3P24-201ENST00000593398 557 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC111186.1-201ENST00000604684 130 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC009948.4-201ENST00000604692 675 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC025175.1-201ENST00000606482 759 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 FAM72A-208ENST00000607379 1139 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 PART1_2.1-201ENST00000612397 250 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 MIR6070-201ENST00000613967 103 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC006386.1-201ENST00000619436 415 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC017104.5-201ENST00000637647 639 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 CASC19-212ENST00000641153 1287 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AL596275.2-208ENST00000641192 594 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 AC005261.2-201ENST00000593427 4258 ntBASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM39Q9HCM9 ATP5BP1-201ENST00000411980 1574 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AC005839.1-201ENST00000624148 3213 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 TRIM53CP-201ENST00000531490 1354 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AL512353.3-201ENST00000417517 1326 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 RNA5SP176-201ENST00000390956 110 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 YWHAZP4-201ENST00000392459 708 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 NPM1P38-201ENST00000403835 865 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 RPLP1P10-201ENST00000413972 339 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 RPL5P2-201ENST00000429598 854 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 MTND5P25-201ENST00000430499 799 ntBASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.86□□□□□ -1.31
TRIM39Q9HCM9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms