Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 CASC19-246ENST00000641625 1606 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 RNA5SP346-201ENST00000363541 121 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 SNORA11B-201ENST00000408175 129 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 CXCR2P1-202ENST00000443392 1074 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 EEF1B2P3-201ENST00000447718 678 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC118758.1-202ENST00000454719 225 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AL133351.3-201ENST00000454998 193 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC122718.2-201ENST00000505325 591 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AL589765.6-201ENST00000601909 549 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC008555.7-201ENST00000605008 583 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 AC022106.1-201ENST00000612834 766 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 MIR6811-201ENST00000620409 58 ntBASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
LRTM1Q9HBL6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 AC024587.1-201ENST00000505925 2157 ntBASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
LRTM1Q9HBL6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 SNORD1C-201ENST00000363315 78 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 RN7SKP250-201ENST00000363924 321 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AL157702.1-201ENST00000398764 426 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AL133260.1-201ENST00000405720 405 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 RPL23AP60-201ENST00000450011 454 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 RPS7P10-201ENST00000464254 603 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 TDGP1-201ENST00000543961 1229 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AC141002.1-201ENST00000607025 279 ntBASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LRTM1Q9HBL6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 YWHAZP4-201ENST00000392459 708 ntBASIC5.88□□□□□ -1.47
LRTM1Q9HBL6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms