Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CUBNP3-201ENST00000457461 1784 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC015820.1-201ENST00000473882 321 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 RPS14P8-201ENST00000478778 369 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 MTND4P8-201ENST00000514997 1362 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 RNA5SP303-201ENST00000516192 130 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC007346.2-201ENST00000564816 892 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC145350.1-201ENST00000567426 208 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 MTND3P13-201ENST00000574391 343 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC061975.5-201ENST00000584928 1441 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR5AH1P-201ENST00000595968 283 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC114878.2-201ENST00000604863 1251 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR2BH1P-201ENST00000608850 864 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL121890.3-201ENST00000618494 516 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC123767.1-202ENST00000620407 817 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC011815.3-201ENST00000624194 473 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 FRG1EP-201ENST00000634469 770 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RN7SKP62-201ENST00000384539 329 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 MCTS2P-201ENST00000394552 546 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC023141.10-201ENST00000415634 200 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RPS24P7-201ENST00000416921 246 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 MTCO3P4-201ENST00000419236 787 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 PPIAP23-201ENST00000420099 497 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RPS4XP16-201ENST00000427198 791 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RNF11P2-201ENST00000427702 440 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 Z68868.1-201ENST00000429048 544 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AL121916.1-201ENST00000429405 308 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AF274573.1-201ENST00000430535 494 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 OR51B8P-201ENST00000449892 769 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 MRPS21P1-201ENST00000453850 223 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 PSMC1P13-201ENST00000458195 985 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC008837.1-201ENST00000511513 412 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC104417.1-201ENST00000523974 751 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC008126.1-201ENST00000549019 480 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AL109741.3-201ENST00000561748 592 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 RBM22P1-201ENST00000578589 1214 ntBASIC7.13□□□□□ -1.27
TRIM55Q9BYV6 MIR5095-201ENST00000578844 88 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms