Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HDHD3Q9BSH5 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HDHD3Q9BSH5 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
HDHD3Q9BSH5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 ARSFP1-201ENST00000398758 477 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 CUBNP2-201ENST00000443534 1139 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AL451063.1-201ENST00000450164 1133 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AL034369.1-201ENST00000453808 477 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 RPL34P33-201ENST00000486062 334 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AC090058.1-201ENST00000498788 435 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 RNA5SP96-201ENST00000516041 107 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AC131935.1-201ENST00000524621 333 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 CYCSP25-201ENST00000525280 316 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 SNORA74.4-201ENST00000607595 199 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AC093388.1-201ENST00000609166 430 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 RPS2P45-201ENST00000469997 2057 ntBASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDHD3Q9BSH5 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC239868.2-201ENST00000564237 4527 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC011933.2-201ENST00000578539 2790 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 OR10R3P-201ENST00000361688 942 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 ZNF37CP-201ENST00000406795 241 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RPS15AP30-201ENST00000420976 390 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC128677.1-201ENST00000436016 442 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 POU5F1P5-201ENST00000445059 658 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RN7SL267P-201ENST00000485107 261 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RPL23AP40-201ENST00000487630 390 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RN7SL104P-201ENST00000498686 293 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 KHDC1P1-201ENST00000511053 508 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 IGKV2-19-201ENST00000518132 283 ntBASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDHD3Q9BSH5 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms