Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC026956.1-201ENST00000558741 396 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00557-201ENST00000563184 1279 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 MT1CP-201ENST00000567054 174 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC004805.3-201ENST00000603178 310 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 NDUFB9P1-201ENST00000604683 510 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC120053.1-201ENST00000607706 736 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC114546.4-201ENST00000624413 369 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC103703.1-201ENST00000634783 663 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CDK5RAP1Q96SZ6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 WBP11P1-201ENST00000562560 1931 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 MTCO2P31-201ENST00000402702 684 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 PTGES3P2-201ENST00000407942 482 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 RN7SKP221-201ENST00000410420 301 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC106883.1-201ENST00000418805 562 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 FABP5P1-201ENST00000423401 411 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 FABP5P2-201ENST00000439042 408 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC234771.2-201ENST00000445718 597 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC025857.1-201ENST00000525252 377 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 UBTFL10-201ENST00000528532 562 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC084759.1-201ENST00000561168 290 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AP000919.1-201ENST00000582850 985 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 NIFKP6-201ENST00000598115 845 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AL445647.2-201ENST00000615170 130 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC097372.4-201ENST00000625025 466 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 OR5AC4P-202ENST00000642086 985 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 AC008957.3-201ENST00000624112 2242 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 LCOR-201ENST00000286067 4542 ntBASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDK5RAP1Q96SZ6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms