Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC018797.1-201ENST00000510791 255 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC108103.1-201ENST00000511286 446 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 RNA5SP441-201ENST00000516809 88 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 RNA5SP400-201ENST00000517155 111 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AP000619.2-201ENST00000546014 969 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 MIR3189-201ENST00000578735 73 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AP001823.1-201ENST00000604056 1003 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 RPSAP75-201ENST00000605848 301 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AL591167.1-201ENST00000607321 456 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AL080312.2-201ENST00000613001 630 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 AL591926.1-201ENST00000620542 217 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 MIR6806-201ENST00000622141 64 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 CASC19-274ENST00000642018 970 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 AC092692.1-201ENST00000623625 2595 ntBASIC6.2□□□□□ -1.42
VPS35Q96QK1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.2□□□□□ -1.42
VPS35Q96QK1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
VPS35Q96QK1 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AL133243.2-201ENST00000610331 1621 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC099535.1-201ENST00000408928 371 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 RN7SKP108-201ENST00000411367 328 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 RPSAP65-201ENST00000429660 595 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC108479.1-201ENST00000431142 427 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 RPSAP41-201ENST00000439695 860 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC016908.1-201ENST00000442571 1219 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AL022237.1-201ENST00000446663 358 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 RN7SL254P-201ENST00000460609 284 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 HMGN1P17-201ENST00000513734 295 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 OR7E158P-201ENST00000524483 910 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC007066.2-202ENST00000566531 914 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC002519.2-203ENST00000567043 837 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC004232.2-201ENST00000574245 821 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 MIR3154-201ENST00000577829 84 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 MIR4701-201ENST00000583094 63 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 MIR6780B-201ENST00000610307 79 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AL357140.4-201ENST00000636827 412 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AP001153.1-201ENST00000641024 338 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AL449283.1-201ENST00000602631 3403 ntBASIC6.19□□□□□ -1.42
VPS35Q96QK1 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.19□□□□□ -1.42
VPS35Q96QK1 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VPS35Q96QK1 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.18□□□□□ -1.42
VPS35Q96QK1 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
VPS35Q96QK1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms