Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC004129.2-201ENST00000457229 287 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC026826.1-201ENST00000493002 361 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 AC022164.1-201ENST00000568767 2673 ntBASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
CSMD1Q96PZ7 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 RPS3AP15-201ENST00000483874 781 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC083795.1-201ENST00000491760 320 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 TXNP4-201ENST00000575018 310 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AL590392.1-201ENST00000604960 446 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AL445528.2-201ENST00000620582 470 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 MAK-202ENST00000354489 3941 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 GTF2IP2-201ENST00000424290 697 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC100784.1-201ENST00000522790 310 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 UGT2B27P-201ENST00000505092 1620 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC114786.1-201ENST00000512892 1415 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 DUTP5-201ENST00000406790 469 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 RPL7P45-201ENST00000455851 743 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 RANP2-201ENST00000456833 229 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC022215.1-201ENST00000481770 362 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 AC006116.3-201ENST00000592968 361 ntBASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC4.95□□□□□ -1.62
CSMD1Q96PZ7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 GNL2P1-201ENST00000451274 2190 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 LDHBP2-201ENST00000456969 1005 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC117395.1-201ENST00000487390 403 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC011840.5-201ENST00000582125 771 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AP000919.1-201ENST00000582850 985 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 RN7SKP29-201ENST00000410957 272 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC096537.2-201ENST00000413707 714 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC073594.1-201ENST00000462065 364 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC119403.2-201ENST00000590960 598 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 AC008745.1-201ENST00000604064 271 ntBASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.94□□□□□ -1.62
CSMD1Q96PZ7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms