Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ALMS1Q8TCU4 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AL389915.2-201ENST00000454576 441 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC007686.1-201ENST00000488511 463 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AP000676.2-201ENST00000529711 301 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 MIR4505-201ENST00000582238 73 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 MIR378J-201ENST00000611988 109 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 FAR2P2-201ENST00000413041 594 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 FAR2P4-202ENST00000425399 584 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 CYP4F32P-201ENST00000426492 504 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 RPS27P18-201ENST00000431701 247 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC105233.1-201ENST00000498840 781 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 RNU6-615P-201ENST00000516065 106 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 CDC42P3-201ENST00000518493 633 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC062022.1-201ENST00000451026 1684 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AL589647.1-201ENST00000402485 466 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AL023284.3-201ENST00000407767 334 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AL357752.1-201ENST00000412817 349 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC005033.1-201ENST00000428904 813 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 CUBNP2-201ENST00000443534 1139 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 RN7SL165P-201ENST00000477476 291 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 HDAC1P2-201ENST00000453661 1398 ntBASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
ALMS1Q8TCU4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC023245.1-201ENST00000468501 517 ntBASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC106800.2-201ENST00000514009 1103 ntBASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC137768.1-201ENST00000549998 553 ntBASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 OR7A11P-201ENST00000597719 953 ntBASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 AC105105.5-201ENST00000622635 1294 ntBASIC4.03□□□□□ -1.77
ALMS1Q8TCU4 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ALMS1Q8TCU4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
ALMS1Q8TCU4 AC105342.1-201ENST00000378334 6848 ntBASIC4.02□□□□□ -1.77
ALMS1Q8TCU4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.02□□□□□ -1.77
ALMS1Q8TCU4 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms