Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC130360.1-201ENST00000425489 1117 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 RPL34P33-201ENST00000486062 334 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 OR5H7P-201ENST00000514084 930 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC130365.2-201ENST00000525882 1201 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AP000662.1-201ENST00000530952 487 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 OXSM-209ENST00000626005 309 ntTSL 3 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AL117339.4-201ENST00000608335 7063 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC024587.1-201ENST00000505925 2157 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 HNRNPA1P54-201ENST00000411857 9714 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 LYARP1-201ENST00000436977 1501 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 RNU1-84P-201ENST00000365447 164 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC245096.1-201ENST00000413104 546 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 SLC20A1P1-201ENST00000413906 956 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 Z68868.1-201ENST00000429048 544 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC022415.1-202ENST00000486612 523 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC100767.2-201ENST00000604840 693 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AL021707.7-201ENST00000607991 416 ntBASIC1.9□□□□□ -2.1
SYNE1Q8NF91 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC1.9□□□□□ -2.1
SYNE1Q8NF91 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AL034546.1-201ENST00000623740 3693 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 MIR199B-201ENST00000384849 110 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 HMGB1P32-201ENST00000425971 565 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AL121776.1-201ENST00000429337 372 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 DEFA11P-201ENST00000446470 261 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 SCARNA18.1-201ENST00000516330 83 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 FAU-203ENST00000525297 355 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC008521.2-201ENST00000591021 259 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC012175.1-201ENST00000603755 531 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC022106.1-201ENST00000612834 766 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC025470.1-201ENST00000510053 2032 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 RBPJP7-201ENST00000442803 1447 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 RBPJP5-201ENST00000449433 1447 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 DPY19L1P1-201ENST00000417811 2594 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 RN7SKP237-201ENST00000364663 301 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC092017.2-201ENST00000427600 362 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC011225.1-201ENST00000457751 369 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 RN7SL610P-201ENST00000463845 291 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 PPIAP19-201ENST00000486414 492 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 RNA5SP340-201ENST00000517132 107 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AP000864.1-201ENST00000609424 650 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AC025162.2-201ENST00000619602 560 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CGA-206ENST00000630630 832 ntTSL 2 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CASC19-228ENST00000641414 1684 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AL137058.3-201ENST00000624531 3099 ntBASIC1.9□□□□□ -2.11
SYNE1Q8NF91 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CAST-202ENST00000325674 3356 ntTSL 5 BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SYNE1Q8NF91 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms