Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL354685.2-201ENST00000448218 1447 ntBASIC6.72□□□□□ -1.33
ATG4DQ86TL0 HDAC1P1-201ENST00000455482 1445 ntBASIC6.72□□□□□ -1.33
ATG4DQ86TL0 AC073429.2-201ENST00000569694 1444 ntBASIC6.72□□□□□ -1.33
ATG4DQ86TL0 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 AC022306.1-201ENST00000560489 1562 ntBASIC6.72□□□□□ -1.33
ATG4DQ86TL0 OR4C1P-202ENST00000641065 1569 ntBASIC6.72□□□□□ -1.33
ATG4DQ86TL0 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 AL606490.2-201ENST00000457562 1330 ntBASIC6.72□□□□□ -1.33
ATG4DQ86TL0 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
ATG4DQ86TL0 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 LINC01692-201ENST00000441009 2719 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 DDX50P1-201ENST00000438163 2400 ntBASIC6.71□□□□□ -1.33
ATG4DQ86TL0 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 LINC02035-201ENST00000610128 5476 ntBASIC6.71□□□□□ -1.33
ATG4DQ86TL0 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 VEZF1P1-201ENST00000423931 1541 ntBASIC6.71□□□□□ -1.33
ATG4DQ86TL0 API5P1-201ENST00000424316 1510 ntBASIC6.71□□□□□ -1.33
ATG4DQ86TL0 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
ATG4DQ86TL0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AL603750.1-201ENST00000624216 1717 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 PWRN1-212ENST00000569908 1435 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 FGF7P2-201ENST00000332473 296 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 RN7SKP36-201ENST00000363997 312 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 SNORD116.1-201ENST00000365628 92 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 RNU6-224P-201ENST00000384055 107 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 Y_RNA.578-201ENST00000390903 88 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 PTMAP8-201ENST00000397729 342 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 VDAC2P1-201ENST00000399358 958 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AL109913.1-201ENST00000421173 514 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 GAPDHP73-201ENST00000423411 1007 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 NAP1L4P2-201ENST00000425958 899 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 MTND1P32-201ENST00000433043 938 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC108039.2-201ENST00000440214 359 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 MTND1P30-201ENST00000441241 901 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 CASP3P1-201ENST00000446037 609 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 IGBP1P3-201ENST00000447449 1000 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 TCEAL4P1-201ENST00000453620 588 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 RN7SL228P-201ENST00000470060 303 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 BNIP3P41-201ENST00000503774 571 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC004069.2-201ENST00000505438 1114 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 RPL37P25-201ENST00000507308 276 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 FABP5P6-201ENST00000510588 409 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 OR7E83P-201ENST00000511021 970 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 OR5F2P-201ENST00000532761 941 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 SAA3P-201ENST00000533267 365 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 FRG2IP-201ENST00000563581 781 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC024451.4-201ENST00000602578 752 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AP001836.1-201ENST00000604675 523 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC128687.1-201ENST00000605304 619 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC015849.2-201ENST00000605738 409 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC023310.4-201ENST00000613130 650 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC012254.5-201ENST00000623573 478 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 AC099654.14-201ENST00000638599 341 ntBASIC6.71□□□□□ -1.34
ATG4DQ86TL0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
ATG4DQ86TL0 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms