Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RCC2P2-201ENST00000422174 918 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL445528.1-201ENST00000426330 420 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL596268.1-201ENST00000427910 1048 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL392003.1-201ENST00000434394 243 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL592114.2-201ENST00000440142 532 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC023274.2-201ENST00000445264 521 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 RPS27AP3-201ENST00000453803 454 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 RPS10P28-201ENST00000480396 498 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC008628.1-201ENST00000508663 265 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 SETP12-201ENST00000514068 805 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 OR4R2P-201ENST00000530815 597 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 MTND2P17-201ENST00000550281 688 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 LINC00557-201ENST00000563184 1279 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC040174.2-201ENST00000602701 465 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC073111.2-201ENST00000605657 1075 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL021368.3-201ENST00000607119 578 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL590410.1-201ENST00000617925 333 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL162377.2-201ENST00000624532 337 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC125238.2-201ENST00000430003 1440 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 GUCY1B2-204ENST00000531898 1979 ntBASIC5.71□□□□□ -1.5
SHFQ7M4L6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SHFQ7M4L6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.71□□□□□ -1.5
SHFQ7M4L6 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 RNA5SP429-201ENST00000363688 109 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 MRPS6P2-201ENST00000381143 370 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AL391419.1-201ENST00000398901 1275 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 RPL18AP14-201ENST00000417685 526 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 PPIAP23-201ENST00000420099 497 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AL139184.1-202ENST00000422303 222 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 SEC63P1-201ENST00000425785 1258 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AL845321.1-201ENST00000444603 348 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AL929410.2-201ENST00000451170 189 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 OR51A1P-201ENST00000511110 946 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 RNU6-760P-201ENST00000516078 97 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 RN7SKP196-201ENST00000516267 345 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC010287.1-201ENST00000566916 357 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 FXYD6P1-201ENST00000604857 285 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 MIR6085-201ENST00000618314 110 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC021766.1-201ENST00000624404 741 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC006453.3-201ENST00000635891 377 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 AC015799.1-201ENST00000622996 3122 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SHFQ7M4L6 ZNF101P1-201ENST00000435701 1720 ntBASIC5.7□□□□□ -1.5
SHFQ7M4L6 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SHFQ7M4L6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms