Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
GABPAQ06546 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 RNA5SP375-201ENST00000362975 119 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 MIR323B-201ENST00000385269 82 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.16□□□□□ -1.26
GABPAQ06546 KIF4CP-201ENST00000422742 1279 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 AC245884.2-201ENST00000426257 404 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 PCBP2P1-201ENST00000437262 977 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.16□□□□□ -1.26
GABPAQ06546 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.16□□□□□ -1.26
GABPAQ06546 AC007998.1-201ENST00000474156 672 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.16□□□□□ -1.26
GABPAQ06546 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.16□□□□□ -1.26
GABPAQ06546 AC020916.2-201ENST00000591242 360 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.16□□□□□ -1.26
GABPAQ06546 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.16□□□□□ -1.26
GABPAQ06546 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.16□□□□□ -1.26
GABPAQ06546 AC008691.1-209ENST00000642094 814 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
GABPAQ06546 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 AOX3P-204ENST00000491025 2107 ntBASIC7.16□□□□□ -1.26
GABPAQ06546 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
GABPAQ06546 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.16□□□□□ -1.26
GABPAQ06546 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
GABPAQ06546 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.16□□□□□ -1.26
GABPAQ06546 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
GABPAQ06546 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
GABPAQ06546 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
GABPAQ06546 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
GABPAQ06546 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.15□□□□□ -1.26
GABPAQ06546 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.15□□□□□ -1.26
GABPAQ06546 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 RNA5SP435-201ENST00000364044 108 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 RN7SKP292-201ENST00000365522 317 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.15□□□□□ -1.26
GABPAQ06546 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 BX323845.3-201ENST00000428215 527 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.15□□□□□ -1.26
GABPAQ06546 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.15□□□□□ -1.26
GABPAQ06546 UBFD1P1-201ENST00000473259 814 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 AC114728.1-201ENST00000488289 483 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 RPL7P51-201ENST00000490532 749 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
GABPAQ06546 IGLVIV-64-201ENST00000518581 301 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.15□□□□□ -1.26
GABPAQ06546 AC119403.2-201ENST00000590960 598 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 AC008521.2-201ENST00000591021 259 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.15□□□□□ -1.26
GABPAQ06546 AC103703.1-201ENST00000634783 663 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.15□□□□□ -1.26
GABPAQ06546 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.15□□□□□ -1.26
GABPAQ06546 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
GABPAQ06546 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
GABPAQ06546 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
GABPAQ06546 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.15□□□□□ -1.27
GABPAQ06546 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
GABPAQ06546 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
GABPAQ06546 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
GABPAQ06546 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
GABPAQ06546 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
GABPAQ06546 OR52B3P-201ENST00000314715 928 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 RN7SKP78-201ENST00000364711 318 ntBASIC7.14□□□□□ -1.27
GABPAQ06546 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms