Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL079303.1-201ENST00000486611 463 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 GOLGA5P1-201ENST00000507317 980 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC136777.2-201ENST00000522979 358 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 OR4A40P-201ENST00000533878 948 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 MYL2-203ENST00000548438 664 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL121579.2-201ENST00000555466 590 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC019322.1-201ENST00000571869 389 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC025857.2-201ENST00000602711 238 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC004805.3-201ENST00000603178 310 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 TCP11X1-202ENST00000622971 1372 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC109446.4-201ENST00000623235 2755 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 GUCY1B2-204ENST00000531898 1979 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AOX3P-204ENST00000491025 2107 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 KYNUP3-201ENST00000574386 1341 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 USP9YP3-201ENST00000434481 1766 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RNA5SP308-201ENST00000362532 115 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RNA5SP155-201ENST00000411154 129 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 MRPS21P5-201ENST00000417885 231 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 NPM1P23-201ENST00000440193 849 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 DEFB109A-201ENST00000482450 265 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RPL5P33-201ENST00000487833 905 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RN7SL284P-201ENST00000498823 275 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC093870.1-201ENST00000506837 213 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RPL3P13-201ENST00000550415 216 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC023080.1-201ENST00000551663 931 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC023968.1-201ENST00000560719 475 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 OR4C49P-201ENST00000563891 900 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 PPIAP14-201ENST00000577627 496 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC090774.2-201ENST00000584708 322 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AP001357.1-201ENST00000586304 1053 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RPL29P33-201ENST00000587474 316 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RPL7AP69-201ENST00000595306 806 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL078624.2-201ENST00000605063 554 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AC114477.1-201ENST00000605097 605 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL021368.3-201ENST00000607119 578 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL008723.3-201ENST00000608926 449 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 LINC02495-203ENST00000636704 242 ntBASIC4.76□□□□□ -1.65
HIST1H1AQ02539 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms