Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 RNA5SP110-201ENST00000362638 115 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.21□□□□□ -1.42
AP1S1P61966 LCN1P2-201ENST00000372030 223 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 SNORA70H-201ENST00000383910 135 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 SNORA70J-201ENST00000384182 135 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 RNA5SP431-201ENST00000410312 120 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.21□□□□□ -1.42
AP1S1P61966 RPL35AP31-201ENST00000418340 337 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 AK3P5-201ENST00000432033 519 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.21□□□□□ -1.42
AP1S1P61966 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 SEPT14P12-201ENST00000442280 560 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 RPL6P30-201ENST00000443382 862 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AL022319.1-201ENST00000458183 1167 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 RN7SL170P-201ENST00000487098 295 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 FTH1P8-201ENST00000498161 514 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 Vault.2-201ENST00000516519 98 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC006512.2-201ENST00000543250 486 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC092332.1-201ENST00000563684 829 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC020916.2-201ENST00000591242 360 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AC141002.1-201ENST00000607025 279 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 AL137246.2-201ENST00000613439 662 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 RFPL4AP6-201ENST00000616792 846 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 AL512652.1-201ENST00000619006 500 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC104966.1-201ENST00000467010 1464 ntBASIC6.21□□□□□ -1.42
AP1S1P61966 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
AP1S1P61966 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.21□□□□□ -1.42
AP1S1P61966 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
AP1S1P61966 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
AP1S1P61966 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.2□□□□□ -1.42
AP1S1P61966 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
AP1S1P61966 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 AC022325.1-201ENST00000502748 2199 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
AP1S1P61966 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.2□□□□□ -1.42
AP1S1P61966 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 AC107977.1-201ENST00000355745 939 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.2□□□□□ -1.42
AP1S1P61966 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
AP1S1P61966 AL132875.1-201ENST00000403623 949 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.2□□□□□ -1.42
AP1S1P61966 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 TMA16P2-201ENST00000413187 601 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 RPS17P17-201ENST00000419392 409 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.2□□□□□ -1.42
AP1S1P61966 RPL24P2-201ENST00000421023 475 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AC007562.1-201ENST00000421819 517 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.2□□□□□ -1.42
AP1S1P61966 AC007679.3-201ENST00000434035 414 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 PNKDP1-201ENST00000435914 430 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 TRIM60P16-201ENST00000444048 694 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AC023274.2-201ENST00000445264 521 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AC073594.1-201ENST00000462065 364 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 PPP1R11P1-201ENST00000486095 376 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.2□□□□□ -1.42
AP1S1P61966 AC011853.1-201ENST00000518911 454 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AC009879.1-201ENST00000520029 839 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.2□□□□□ -1.42
AP1S1P61966 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.2□□□□□ -1.42
AP1S1P61966 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.2□□□□□ -1.42
AP1S1P61966 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.2□□□□□ -1.42
AP1S1P61966 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AP1S1P61966 GLYATL1P2-202ENST00000588046 902 ntBASIC6.2□□□□□ -1.42
AP1S1P61966 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms