Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VCPP55072 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VCPP55072 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.8□□□□□ -1.32
VCPP55072 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 AC010401.2-201ENST00000575137 4934 ntBASIC6.79□□□□□ -1.32
VCPP55072 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 AC074141.1-201ENST00000588129 2995 ntBASIC6.79□□□□□ -1.32
VCPP55072 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.79□□□□□ -1.32
VCPP55072 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 RPL5P20-201ENST00000403848 896 ntBASIC6.79□□□□□ -1.32
VCPP55072 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.79□□□□□ -1.32
VCPP55072 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 DNAJC19P5-201ENST00000443295 316 ntBASIC6.79□□□□□ -1.32
VCPP55072 OR2L9P-201ENST00000444456 913 ntBASIC6.79□□□□□ -1.32
VCPP55072 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.79□□□□□ -1.32
VCPP55072 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 RPL17P2-201ENST00000491913 451 ntBASIC6.79□□□□□ -1.32
VCPP55072 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 RPL3P13-201ENST00000550415 216 ntBASIC6.79□□□□□ -1.32
VCPP55072 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.79□□□□□ -1.32
VCPP55072 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.79□□□□□ -1.32
VCPP55072 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.79□□□□□ -1.32
VCPP55072 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.79□□□□□ -1.32
VCPP55072 LINC00556-201ENST00000569603 412 ntBASIC6.79□□□□□ -1.32
VCPP55072 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 MIR4700-201ENST00000578311 74 ntBASIC6.79□□□□□ -1.32
VCPP55072 MIR4489-201ENST00000578869 62 ntBASIC6.79□□□□□ -1.32
VCPP55072 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.79□□□□□ -1.32
VCPP55072 SDR42E1P1-201ENST00000611327 477 ntBASIC6.79□□□□□ -1.32
VCPP55072 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.79□□□□□ -1.32
VCPP55072 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VCPP55072 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
VCPP55072 AC073365.1-203ENST00000641055 1992 ntBASIC6.78□□□□□ -1.32
VCPP55072 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 EIF3EP1-201ENST00000433978 1316 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
VCPP55072 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 AC005702.3-201ENST00000585345 1447 ntBASIC6.78□□□□□ -1.32
VCPP55072 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 AL355355.1-201ENST00000442900 793 ntBASIC6.78□□□□□ -1.32
VCPP55072 CXCR2P1-202ENST00000443392 1074 ntBASIC6.78□□□□□ -1.32
VCPP55072 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.78□□□□□ -1.32
VCPP55072 VN1R38P-201ENST00000450265 887 ntBASIC6.78□□□□□ -1.32
VCPP55072 RPL5P14-201ENST00000494197 878 ntBASIC6.78□□□□□ -1.32
VCPP55072 RPL19P11-201ENST00000495944 589 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.78□□□□□ -1.32
VCPP55072 DPPA3P2-202ENST00000557188 1219 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 AL390726.5-202ENST00000564800 256 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.78□□□□□ -1.32
VCPP55072 AC004805.3-201ENST00000603178 310 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC018690.1-201ENST00000608144 626 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC092266.1-201ENST00000610958 165 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC005899.7-201ENST00000618199 588 ntBASIC6.78□□□□□ -1.32
VCPP55072 AC069234.4-201ENST00000621276 412 ntBASIC6.78□□□□□ -1.32
VCPP55072 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 CASC19-246ENST00000641625 1606 ntBASIC6.78□□□□□ -1.32
VCPP55072 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.78□□□□□ -1.32
VCPP55072 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VCPP55072 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
VCPP55072 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
VCPP55072 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms