Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC7.42□□□□□ -1.22
PMS1P54277 MTCO1P47-201ENST00000523889 1271 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC7.42□□□□□ -1.22
PMS1P54277 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 AL512310.9-201ENST00000553311 948 ntBASIC7.42□□□□□ -1.22
PMS1P54277 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.42□□□□□ -1.22
PMS1P54277 AL356801.1-201ENST00000559320 294 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC026458.1-201ENST00000564330 438 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC010547.7-201ENST00000570323 333 ntBASIC7.42□□□□□ -1.22
PMS1P54277 WDR45BP1-201ENST00000583470 1029 ntBASIC7.42□□□□□ -1.22
PMS1P54277 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 Z82195.1-201ENST00000604558 398 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AL590032.1-201ENST00000604920 252 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.42□□□□□ -1.22
PMS1P54277 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 AC092140.2-201ENST00000618027 521 ntBASIC7.42□□□□□ -1.22
PMS1P54277 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 AC106782.7-201ENST00000624024 418 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC133555.5-201ENST00000624430 418 ntBASIC7.42□□□□□ -1.22
PMS1P54277 SNX18P10-201ENST00000625014 519 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC122713.2-201ENST00000624942 3335 ntBASIC7.42□□□□□ -1.22
PMS1P54277 AC013488.1-201ENST00000526618 1838 ntBASIC7.42□□□□□ -1.22
PMS1P54277 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PMS1P54277 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PMS1P54277 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 OR10D1P-201ENST00000355343 936 ntBASIC7.41□□□□□ -1.22
PMS1P54277 RNU1-55P-201ENST00000365510 158 ntBASIC7.41□□□□□ -1.22
PMS1P54277 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.41□□□□□ -1.22
PMS1P54277 RNU6-481P-201ENST00000384194 107 ntBASIC7.41□□□□□ -1.22
PMS1P54277 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 RN7SKP188-201ENST00000410789 317 ntBASIC7.41□□□□□ -1.22
PMS1P54277 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 RAB9AP4-201ENST00000415230 609 ntBASIC7.41□□□□□ -1.22
PMS1P54277 MICG-208ENST00000416822 132 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.41□□□□□ -1.22
PMS1P54277 VN1R108P-201ENST00000431580 830 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC007563.3-201ENST00000433233 371 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 MTND4P32-201ENST00000437189 1237 ntBASIC7.41□□□□□ -1.22
PMS1P54277 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.41□□□□□ -1.22
PMS1P54277 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.41□□□□□ -1.22
PMS1P54277 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 BZW1P1-201ENST00000454901 1240 ntBASIC7.41□□□□□ -1.22
PMS1P54277 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 AC025271.1-201ENST00000485045 429 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 RPL7L1P7-201ENST00000509986 724 ntBASIC7.41□□□□□ -1.22
PMS1P54277 SNX18P23-201ENST00000510867 677 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC017007.1-201ENST00000511960 415 ntBASIC7.41□□□□□ -1.22
PMS1P54277 PHBP2-201ENST00000532859 806 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.41□□□□□ -1.22
PMS1P54277 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC7.41□□□□□ -1.22
PMS1P54277 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 VN1R78P-201ENST00000597393 564 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AL953862.2-201ENST00000603089 820 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.41□□□□□ -1.22
PMS1P54277 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.41□□□□□ -1.22
PMS1P54277 AC090116.1-201ENST00000615679 446 ntBASIC7.41□□□□□ -1.22
PMS1P54277 AC009090.3-201ENST00000616553 565 ntBASIC7.41□□□□□ -1.22
PMS1P54277 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.41□□□□□ -1.22
PMS1P54277 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.41□□□□□ -1.22
PMS1P54277 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PMS1P54277 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.41□□□□□ -1.22
PMS1P54277 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.41□□□□□ -1.22
PMS1P54277 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PMS1P54277 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PMS1P54277 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PMS1P54277 AC011815.2-201ENST00000618230 2021 ntBASIC7.4□□□□□ -1.22
PMS1P54277 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
PMS1P54277 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.4□□□□□ -1.22
PMS1P54277 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PMS1P54277 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PMS1P54277 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.4□□□□□ -1.22
PMS1P54277 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 357.1 ms