Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RN7SL270P-201ENST00000579643 281 ntBASIC6.77□□□□□ -1.33
NEK3P51956 MIR4732-201ENST00000581873 76 ntBASIC6.77□□□□□ -1.33
NEK3P51956 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.77□□□□□ -1.33
NEK3P51956 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.77□□□□□ -1.33
NEK3P51956 RPL29P33-201ENST00000587474 316 ntBASIC6.77□□□□□ -1.33
NEK3P51956 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.77□□□□□ -1.33
NEK3P51956 AC091133.5-201ENST00000603088 301 ntBASIC6.77□□□□□ -1.33
NEK3P51956 AC005014.3-201ENST00000605985 190 ntBASIC6.77□□□□□ -1.33
NEK3P51956 AL096803.3-201ENST00000609032 532 ntBASIC6.77□□□□□ -1.33
NEK3P51956 CR589904.2-201ENST00000612533 440 ntBASIC6.77□□□□□ -1.33
NEK3P51956 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.77□□□□□ -1.33
NEK3P51956 MIR7854-201ENST00000620068 65 ntBASIC6.77□□□□□ -1.33
NEK3P51956 AC012653.2-201ENST00000621880 420 ntBASIC6.77□□□□□ -1.33
NEK3P51956 AC105105.5-201ENST00000622635 1294 ntBASIC6.77□□□□□ -1.33
NEK3P51956 AC018628.1-201ENST00000624147 3819 ntBASIC6.77□□□□□ -1.33
NEK3P51956 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
NEK3P51956 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.77□□□□□ -1.33
NEK3P51956 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
NEK3P51956 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.77□□□□□ -1.33
NEK3P51956 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.77□□□□□ -1.33
NEK3P51956 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.77□□□□□ -1.33
NEK3P51956 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.76□□□□□ -1.33
NEK3P51956 AC010168.2-201ENST00000562691 5428 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC003973.3-201ENST00000624863 2822 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.76□□□□□ -1.33
NEK3P51956 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 GSTA12P-201ENST00000402398 508 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AL359694.1-201ENST00000403247 604 ntBASIC6.76□□□□□ -1.33
NEK3P51956 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 AC234781.4-201ENST00000419384 244 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC002127.1-201ENST00000421305 225 ntBASIC6.76□□□□□ -1.33
NEK3P51956 MTND4LP13-201ENST00000425022 298 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC239367.3-201ENST00000428996 814 ntBASIC6.76□□□□□ -1.33
NEK3P51956 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.76□□□□□ -1.33
NEK3P51956 MED28P4-201ENST00000433137 572 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC245452.2-201ENST00000435222 392 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC007000.2-201ENST00000442564 487 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC016908.1-201ENST00000442571 1219 ntBASIC6.76□□□□□ -1.33
NEK3P51956 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.76□□□□□ -1.33
NEK3P51956 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 RPL26P30-201ENST00000453533 435 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 MTND1P36-201ENST00000522384 936 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AL445383.1-201ENST00000554689 874 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.76□□□□□ -1.33
NEK3P51956 AC091304.4-201ENST00000565703 620 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AC090079.2-201ENST00000575289 768 ntBASIC6.76□□□□□ -1.33
NEK3P51956 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.76□□□□□ -1.33
NEK3P51956 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 MIR6889-201ENST00000613185 59 ntBASIC6.76□□□□□ -1.33
NEK3P51956 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.76□□□□□ -1.33
NEK3P51956 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
NEK3P51956 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
NEK3P51956 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
NEK3P51956 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
NEK3P51956 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 MAPK10-261ENST00000641050 3109 ntBASIC6.75□□□□□ -1.33
NEK3P51956 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.75□□□□□ -1.33
NEK3P51956 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NEK3P51956 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.75□□□□□ -1.33
NEK3P51956 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
NEK3P51956 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 RNA5SP140-201ENST00000364524 92 ntBASIC6.75□□□□□ -1.33
NEK3P51956 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 RANP4-201ENST00000413361 655 ntBASIC6.75□□□□□ -1.33
NEK3P51956 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NEK3P51956 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 AC019205.1-201ENST00000421830 730 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.75□□□□□ -1.33
NEK3P51956 AC093084.1-201ENST00000424233 687 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 MTND2P21-201ENST00000436242 1042 ntBASIC6.75□□□□□ -1.33
NEK3P51956 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.75□□□□□ -1.33
NEK3P51956 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms