Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 TDGP1-201ENST00000543961 1229 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CR1P49238 HMGN1P26-201ENST00000558737 303 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 MIR212-201ENST00000586026 110 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC020916.2-201ENST00000591242 360 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.42□□□□□ -1.54
CX3CR1P49238 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.42□□□□□ -1.54
CX3CR1P49238 AL589765.6-201ENST00000601909 549 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC027334.1-201ENST00000603257 310 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC010998.3-201ENST00000613871 631 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC010809.3-201ENST00000621310 641 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AC211486.4-201ENST00000621495 113 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 OR7A1P-202ENST00000641542 1158 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CX3CR1P49238 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 AL121768.1-201ENST00000613917 2544 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 AL359091.1-201ENST00000449048 1734 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.42□□□□□ -1.54
CX3CR1P49238 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 AC020656.2-201ENST00000613291 5309 ntBASIC5.42□□□□□ -1.54
CX3CR1P49238 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CX3CR1P49238 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.41□□□□□ -1.54
CX3CR1P49238 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CX3CR1P49238 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CX3CR1P49238 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 RANP7-201ENST00000418085 644 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 RPS7P14-201ENST00000426405 583 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC128677.1-201ENST00000436016 442 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 PA2G4P1-201ENST00000442248 1197 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 CXCR2P1-202ENST00000443392 1074 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 POU5F1P5-201ENST00000445059 658 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AL445687.2-201ENST00000458156 728 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 RN7SL393P-201ENST00000463588 296 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.41□□□□□ -1.54
CX3CR1P49238 RPL12P31-201ENST00000478433 450 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 PPP1R11P1-201ENST00000486095 376 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AC007066.2-202ENST00000566531 914 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CR1P49238 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.41□□□□□ -1.54
CX3CR1P49238 MIR6811-201ENST00000620409 58 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.41□□□□□ -1.54
CX3CR1P49238 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
CX3CR1P49238 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CX3CR1P49238 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CX3CR1P49238 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 NCOA4P2-201ENST00000340589 1813 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.41□□□□□ -1.54
CX3CR1P49238 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CX3CR1P49238 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.41□□□□□ -1.54
CX3CR1P49238 CASC19-246ENST00000641625 1606 ntBASIC5.41□□□□□ -1.54
CX3CR1P49238 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CX3CR1P49238 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.4□□□□□ -1.54
CX3CR1P49238 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.54
CX3CR1P49238 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CX3CR1P49238 AL592429.1-201ENST00000403909 1473 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 AC025470.1-201ENST00000510053 2032 ntBASIC5.4□□□□□ -1.54
CX3CR1P49238 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.4□□□□□ -1.54
CX3CR1P49238 WDR95P-201ENST00000425638 1542 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms