Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 AL023284.3-201ENST00000407767 334 ntBASIC5.76□□□□□ -1.49
RFC3P40938 AL139805.1-201ENST00000407837 289 ntBASIC5.76□□□□□ -1.49
RFC3P40938 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC3P40938 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 NPM1P25-201ENST00000429734 854 ntBASIC5.76□□□□□ -1.49
RFC3P40938 DNAJA1P5-201ENST00000440278 943 ntBASIC5.76□□□□□ -1.49
RFC3P40938 SOCS5P1-201ENST00000440415 949 ntBASIC5.76□□□□□ -1.49
RFC3P40938 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC3P40938 AC144530.1-201ENST00000452862 555 ntBASIC5.76□□□□□ -1.49
RFC3P40938 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.76□□□□□ -1.49
RFC3P40938 COX6B1P4-201ENST00000519826 484 ntBASIC5.76□□□□□ -1.49
RFC3P40938 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.76□□□□□ -1.49
RFC3P40938 AC002519.2-203ENST00000567043 837 ntBASIC5.76□□□□□ -1.49
RFC3P40938 AC007346.1-201ENST00000569208 867 ntBASIC5.76□□□□□ -1.49
RFC3P40938 AC090826.1-203ENST00000569235 490 ntBASIC5.76□□□□□ -1.49
RFC3P40938 OR7A11P-201ENST00000597719 953 ntBASIC5.76□□□□□ -1.49
RFC3P40938 RFPL4AP6-201ENST00000616792 846 ntBASIC5.76□□□□□ -1.49
RFC3P40938 AL132640.3-201ENST00000630473 177 ntBASIC5.76□□□□□ -1.49
RFC3P40938 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFC3P40938 AL157831.2-201ENST00000564681 3095 ntBASIC5.76□□□□□ -1.49
RFC3P40938 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.76□□□□□ -1.49
RFC3P40938 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC3P40938 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC3P40938 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFC3P40938 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC3P40938 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RFC3P40938 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.76□□□□□ -1.49
RFC3P40938 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RFC3P40938 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.75□□□□□ -1.49
RFC3P40938 Z95114.1-201ENST00000624264 14574 ntBASIC5.75□□□□□ -1.49
RFC3P40938 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 LYARP1-201ENST00000436977 1501 ntBASIC5.75□□□□□ -1.49
RFC3P40938 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 COX6B1P3-201ENST00000312310 260 ntBASIC5.75□□□□□ -1.49
RFC3P40938 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 AC079807.1-201ENST00000429993 481 ntBASIC5.75□□□□□ -1.49
RFC3P40938 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 RN7SL643P-201ENST00000471845 291 ntBASIC5.75□□□□□ -1.49
RFC3P40938 RPL12P31-201ENST00000478433 450 ntBASIC5.75□□□□□ -1.49
RFC3P40938 OR7E99P-201ENST00000505750 922 ntBASIC5.75□□□□□ -1.49
RFC3P40938 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.75□□□□□ -1.49
RFC3P40938 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.75□□□□□ -1.49
RFC3P40938 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RFC3P40938 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 MIR4310-201ENST00000582950 57 ntBASIC5.75□□□□□ -1.49
RFC3P40938 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 AL138895.2-201ENST00000603019 178 ntBASIC5.75□□□□□ -1.49
RFC3P40938 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RFC3P40938 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.75□□□□□ -1.49
RFC3P40938 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.75□□□□□ -1.49
RFC3P40938 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFC3P40938 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RFC3P40938 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 AC093225.1-201ENST00000506867 1408 ntBASIC5.74□□□□□ -1.49
RFC3P40938 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 AC005332.9-201ENST00000620266 2921 ntBASIC5.74□□□□□ -1.49
RFC3P40938 RNA5SP110-201ENST00000362638 115 ntBASIC5.74□□□□□ -1.49
RFC3P40938 RNA5SP122-201ENST00000384457 108 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AC004386.1-201ENST00000393214 761 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AL451046.1-201ENST00000406097 534 ntBASIC5.74□□□□□ -1.49
RFC3P40938 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.74□□□□□ -1.49
RFC3P40938 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 RPS7P14-201ENST00000426405 583 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 PNKDP1-201ENST00000435914 430 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms