Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
TOP2AP11388 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC10.33□□□□□ -0.76
TOP2AP11388 MIR1286-201ENST00000408112 78 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC10.33□□□□□ -0.76
TOP2AP11388 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC10.33□□□□□ -0.76
TOP2AP11388 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC10.33□□□□□ -0.76
TOP2AP11388 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC10.33□□□□□ -0.76
TOP2AP11388 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC10.33□□□□□ -0.76
TOP2AP11388 AC093763.2-201ENST00000505334 1223 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC10.33□□□□□ -0.76
TOP2AP11388 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 AC027334.1-201ENST00000603257 310 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 AC020765.1-201ENST00000604296 328 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 METTL15-211ENST00000634762 718 ntTSL 5 BASIC10.33□□□□□ -0.76
TOP2AP11388 CASC19-222ENST00000641321 1173 ntBASIC10.33□□□□□ -0.76
TOP2AP11388 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
TOP2AP11388 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
TOP2AP11388 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC10.32□□□□□ -0.76
TOP2AP11388 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC10.32□□□□□ -0.76
TOP2AP11388 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.32□□□□□ -0.76
TOP2AP11388 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
TOP2AP11388 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC10.32□□□□□ -0.76
TOP2AP11388 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
TOP2AP11388 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 MYL6P5-201ENST00000412707 459 ntBASIC10.32□□□□□ -0.76
TOP2AP11388 RPL35AP24-201ENST00000413846 330 ntBASIC10.32□□□□□ -0.76
TOP2AP11388 AC024558.1-201ENST00000505008 528 ntBASIC10.32□□□□□ -0.76
TOP2AP11388 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC10.32□□□□□ -0.76
TOP2AP11388 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 AL049872.1-201ENST00000556323 322 ntBASIC10.32□□□□□ -0.76
TOP2AP11388 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC10.32□□□□□ -0.76
TOP2AP11388 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.32□□□□□ -0.76
TOP2AP11388 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 AC068870.2-201ENST00000620635 389 ntBASIC10.32□□□□□ -0.76
TOP2AP11388 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC10.32□□□□□ -0.76
TOP2AP11388 AC087516.1-201ENST00000561236 2428 ntBASIC10.32□□□□□ -0.76
TOP2AP11388 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
TOP2AP11388 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
TOP2AP11388 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
TOP2AP11388 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC10.31□□□□□ -0.76
TOP2AP11388 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC10.31□□□□□ -0.76
TOP2AP11388 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 RNU1-19P-201ENST00000363306 165 ntBASIC10.31□□□□□ -0.76
TOP2AP11388 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
TOP2AP11388 AC139365.2-201ENST00000517972 253 ntBASIC10.31□□□□□ -0.76
TOP2AP11388 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC10.31□□□□□ -0.76
TOP2AP11388 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
TOP2AP11388 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
TOP2AP11388 AC118658.2-201ENST00000618697 459 ntBASIC10.31□□□□□ -0.76
TOP2AP11388 AC130448.2-201ENST00000624082 374 ntBASIC10.31□□□□□ -0.76
TOP2AP11388 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC10.31□□□□□ -0.76
TOP2AP11388 AC114786.1-201ENST00000512892 1415 ntBASIC10.31□□□□□ -0.76
TOP2AP11388 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC10.31□□□□□ -0.76
TOP2AP11388 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
TOP2AP11388 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
TOP2AP11388 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
TOP2AP11388 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
TOP2AP11388 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
TOP2AP11388 AC127070.3-201ENST00000503695 3263 ntBASIC10.31□□□□□ -0.76
TOP2AP11388 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
TOP2AP11388 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC10.3□□□□□ -0.76
TOP2AP11388 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC10.3□□□□□ -0.76
TOP2AP11388 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC10.3□□□□□ -0.76
TOP2AP11388 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 SNORA70-201ENST00000384436 135 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 RN7SKP273-201ENST00000411392 314 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 EIF4A1P7-201ENST00000421800 1220 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 AC005297.1-201ENST00000444765 862 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
TOP2AP11388 AL450023.1-201ENST00000450868 751 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 COX6B1P2-201ENST00000489624 230 ntBASIC10.3□□□□□ -0.76
TOP2AP11388 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms