Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CXCL1P09341 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.67□□□□□ -1.66
CXCL1P09341 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL1P09341 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.67□□□□□ -1.66
CXCL1P09341 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL1P09341 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.67□□□□□ -1.66
CXCL1P09341 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CXCL1P09341 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC4.67□□□□□ -1.66
CXCL1P09341 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL1P09341 SMG1P5-202ENST00000529428 4219 ntBASIC4.67□□□□□ -1.66
CXCL1P09341 SMG1P2-201ENST00000566127 4221 ntBASIC4.67□□□□□ -1.66
CXCL1P09341 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CXCL1P09341 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL1P09341 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL1P09341 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CXCL1P09341 U3.7-201ENST00000363668 216 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL1P09341 AL445238.1-204ENST00000400311 463 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 AL079341.1-201ENST00000404701 1207 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 RPSAP44-201ENST00000406712 884 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CXCL1P09341 RPSAP65-201ENST00000429660 595 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 RAB28P2-201ENST00000454299 641 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CXCL1P09341 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 RPL12P24-201ENST00000474907 486 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 RPS16P9-201ENST00000477220 427 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 OR7E157P-201ENST00000494376 911 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 OR7E99P-201ENST00000505750 922 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 RNU6-513P-201ENST00000516104 104 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 IGKV2D-38-201ENST00000518423 240 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL1P09341 MIR4800-201ENST00000537353 80 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC084824.2-201ENST00000548906 345 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC093591.2-201ENST00000565254 3843 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC090826.1-203ENST00000569235 490 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC016839.1-201ENST00000578162 867 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 MIR378C-201ENST00000578683 81 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC4.66□□□□□ -1.66
CXCL1P09341 EXOSC3P2-201ENST00000594464 497 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 AC019257.2-201ENST00000605539 497 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 AC097641.3-201ENST00000613523 464 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 MIR6085-201ENST00000618314 110 ntBASIC4.66□□□□□ -1.66
CXCL1P09341 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.66□□□□□ -1.66
CXCL1P09341 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL1P09341 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.66□□□□□ -1.66
CXCL1P09341 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
CXCL1P09341 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CXCL1P09341 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CXCL1P09341 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.66□□□□□ -1.66
CXCL1P09341 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.66□□□□□ -1.66
CXCL1P09341 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CXCL1P09341 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
CXCL1P09341 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 AC100810.3-201ENST00000633189 2240 ntBASIC4.65□□□□□ -1.66
CXCL1P09341 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CXCL1P09341 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC4.65□□□□□ -1.66
CXCL1P09341 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.65□□□□□ -1.67
CXCL1P09341 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL1P09341 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 RNA5SP301-201ENST00000362537 121 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 RN7SKP130-201ENST00000364924 301 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.65□□□□□ -1.67
CXCL1P09341 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CXCL1P09341 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.65□□□□□ -1.67
CXCL1P09341 RN7SKP91-201ENST00000410852 288 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AC245096.1-201ENST00000413104 546 ntBASIC4.65□□□□□ -1.67
CXCL1P09341 AL662791.3-201ENST00000413771 776 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms