Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC3.66□□□□□ -1.82
PKHD1P08F94 MIR3160-1-201ENST00000577972 85 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 AC012616.1-201ENST00000600294 197 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 AC009163.6-201ENST00000612367 342 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
PKHD1P08F94 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 IMMTP1-201ENST00000435590 2219 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC3.66□□□□□ -1.82
PKHD1P08F94 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 RN7SKP23-201ENST00000625159 4301 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 HSPA8P14-201ENST00000552265 1805 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PKHD1P08F94 ZNF101P1-201ENST00000435701 1720 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PKHD1P08F94 AL133388.1-201ENST00000404509 287 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 PTCD2P2-201ENST00000415579 1095 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 RPL18P10-201ENST00000425606 538 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC3.66□□□□□ -1.82
PKHD1P08F94 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC3.66□□□□□ -1.82
PKHD1P08F94 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC3.66□□□□□ -1.82
PKHD1P08F94 AP000919.1-201ENST00000582850 985 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PKHD1P08F94 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 HSPA8P18-201ENST00000439846 1928 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC3.66□□□□□ -1.82
PKHD1P08F94 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 HIST1H3PS1-201ENST00000404612 417 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 RMRPP5-201ENST00000411156 267 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 CYP4F29P-201ENST00000420685 446 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.66□□□□□ -1.82
PKHD1P08F94 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.66□□□□□ -1.82
PKHD1P08F94 NDUFA5P9-201ENST00000472609 340 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 AC087672.1-201ENST00000479876 766 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 AC015720.2-201ENST00000567709 334 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 AC025574.2-201ENST00000615621 514 ntBASIC3.66□□□□□ -1.82
PKHD1P08F94 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC3.66□□□□□ -1.82
PKHD1P08F94 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC3.66□□□□□ -1.82
PKHD1P08F94 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 CARD8-203ENST00000447740 5210 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC3.66□□□□□ -1.82
PKHD1P08F94 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKHD1P08F94 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 GLULP6-201ENST00000399502 913 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC3.65□□□□□ -1.82
PKHD1P08F94 OR11I1P-201ENST00000486033 954 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.65□□□□□ -1.82
PKHD1P08F94 SCARNA6.1-201ENST00000516989 238 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.65□□□□□ -1.82
PKHD1P08F94 AC126615.2-201ENST00000553003 515 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC3.65□□□□□ -1.82
PKHD1P08F94 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.65□□□□□ -1.82
PKHD1P08F94 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 AC008937.3-201ENST00000606813 1700 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PKHD1P08F94 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
PKHD1P08F94 MGAT2P2-201ENST00000427194 797 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.65□□□□□ -1.82
PKHD1P08F94 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC3.65□□□□□ -1.82
PKHD1P08F94 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.65□□□□□ -1.82
PKHD1P08F94 NRBF2P4-201ENST00000520874 850 ntBASIC3.65□□□□□ -1.82
PKHD1P08F94 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.65□□□□□ -1.82
PKHD1P08F94 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.65□□□□□ -1.82
PKHD1P08F94 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC3.65□□□□□ -1.82
PKHD1P08F94 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PKHD1P08F94 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms