Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 RN7SKP130-201ENST00000364924 301 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 RN7SKP81-201ENST00000365603 331 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.87□□□□□ -1.47
CLPTM1O96005 SNORA5.1-201ENST00000384275 131 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLPTM1O96005 RN7SKP91-201ENST00000410852 288 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AL158827.1-201ENST00000416300 391 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 MRPS21P5-201ENST00000417885 231 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AC000089.1-201ENST00000424559 801 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 RPS3AP38-201ENST00000435889 763 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 HMGN1P32-201ENST00000441744 256 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 RN7SL372P-201ENST00000461982 298 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC007688.1-201ENST00000475592 759 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.87□□□□□ -1.47
CLPTM1O96005 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC021146.11-201ENST00000503319 491 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC010442.1-201ENST00000515583 816 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AP005902.2-201ENST00000518393 307 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC019322.1-201ENST00000571869 389 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 AC017037.4-201ENST00000624526 826 ntBASIC5.87□□□□□ -1.47
CLPTM1O96005 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.87□□□□□ -1.47
CLPTM1O96005 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.87□□□□□ -1.47
CLPTM1O96005 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.87□□□□□ -1.47
CLPTM1O96005 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLPTM1O96005 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CLPTM1O96005 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.87□□□□□ -1.47
CLPTM1O96005 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 AC004023.1-201ENST00000561473 1744 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CLPTM1O96005 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.86□□□□□ -1.47
CLPTM1O96005 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLPTM1O96005 U3.10-201ENST00000364459 214 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 LDHAP5-201ENST00000394996 622 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 RPLP1P10-201ENST00000413972 339 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.86□□□□□ -1.47
CLPTM1O96005 MGAT2P2-201ENST00000427194 797 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 E2F6P1-201ENST00000428850 745 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.86□□□□□ -1.47
CLPTM1O96005 AC073410.1-201ENST00000435125 589 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.86□□□□□ -1.47
CLPTM1O96005 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.86□□□□□ -1.47
CLPTM1O96005 RPL23AP28-201ENST00000448062 470 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.86□□□□□ -1.47
CLPTM1O96005 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 RN7SL790P-201ENST00000474043 298 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 RN7SL654P-201ENST00000479178 292 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 RN7SL267P-201ENST00000485107 261 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 RN7SL350P-201ENST00000492591 299 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 SNX18P23-201ENST00000510867 677 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 CYP4F27P-201ENST00000514557 494 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 AC026616.1-201ENST00000523157 525 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 HMGN1P26-201ENST00000558737 303 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.86□□□□□ -1.47
CLPTM1O96005 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.86□□□□□ -1.47
CLPTM1O96005 AL049840.5-201ENST00000602827 552 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC004890.3-201ENST00000605566 1095 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AL022394.1-201ENST00000606979 292 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AL137000.1-201ENST00000610528 1244 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AP003072.5-201ENST00000623872 773 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 AC027559.1-201ENST00000636288 271 ntBASIC5.86□□□□□ -1.47
CLPTM1O96005 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CLPTM1O96005 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLPTM1O96005 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms