Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
CLDN9O95484 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 MIR551B-201ENST00000384984 96 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AL096800.1-201ENST00000405326 893 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AL139805.1-201ENST00000407837 289 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC245884.2-201ENST00000426257 404 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.92□□□□□ -1.46
CLDN9O95484 IGLV3-4-201ENST00000432300 244 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AC013403.1-201ENST00000436954 263 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 OR3D1P-201ENST00000438288 955 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AC064862.5-201ENST00000440618 334 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 RPL12P49-201ENST00000441100 121 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 AC099670.1-201ENST00000455141 783 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 RPS7P10-201ENST00000464254 603 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 RPL34P33-201ENST00000486062 334 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 RN7SL612P-201ENST00000497704 295 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC095052.1-201ENST00000509955 863 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.92□□□□□ -1.46
CLDN9O95484 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC005632.2-201ENST00000564271 828 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.92□□□□□ -1.46
CLDN9O95484 AP001823.1-201ENST00000604056 1003 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.92□□□□□ -1.46
CLDN9O95484 AC069234.4-201ENST00000621276 412 ntBASIC5.92□□□□□ -1.46
CLDN9O95484 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CLDN9O95484 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.92□□□□□ -1.46
CLDN9O95484 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CLDN9O95484 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN9O95484 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN9O95484 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN9O95484 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC139426.3-201ENST00000605648 2059 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN9O95484 RNA5SP375-201ENST00000362975 119 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 SNORD1C-201ENST00000363315 78 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 GNG5P2-201ENST00000372054 207 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN9O95484 PTCD2P2-201ENST00000415579 1095 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 AL365220.1-201ENST00000432923 399 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC004890.1-201ENST00000461005 181 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 AC044810.1-201ENST00000480271 711 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC124945.1-201ENST00000485133 188 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 RPL23AP40-201ENST00000487630 390 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN9O95484 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN9O95484 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.91□□□□□ -1.46
CLDN9O95484 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.91□□□□□ -1.46
CLDN9O95484 BTG1P1-201ENST00000540396 508 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN9O95484 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN9O95484 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC097641.3-201ENST00000613523 464 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC016583.1-201ENST00000624221 2431 ntBASIC5.91□□□□□ -1.46
CLDN9O95484 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLDN9O95484 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN9O95484 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
CLDN9O95484 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CLDN9O95484 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CLDN9O95484 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CLDN9O95484 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms