Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 SAMMSON-210ENST00000641260 1308 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 SNORD94-201ENST00000386037 137 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 SNORA77.2-201ENST00000408571 112 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC092651.1-201ENST00000426110 312 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 AL365220.1-201ENST00000432923 399 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 PA2G4P1-201ENST00000442248 1197 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN2BO60939 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 AL133351.3-201ENST00000454998 193 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC135983.3-201ENST00000528049 1226 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 AC069234.4-201ENST00000621276 412 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 AC099654.11-201ENST00000638857 294 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 AC079248.1-201ENST00000427568 1546 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.82□□□□□ -1.48
SCN2BO60939 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 AC011416.1-201ENST00000514947 1732 ntBASIC5.82□□□□□ -1.48
SCN2BO60939 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCN2BO60939 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SCN2BO60939 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.82□□□□□ -1.48
SCN2BO60939 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN2BO60939 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SCN2BO60939 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SCN2BO60939 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SCN2BO60939 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 RNU11-201ENST00000387069 134 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN2BO60939 GPN3P1-201ENST00000423883 535 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 IGLV3-4-201ENST00000432300 244 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 USP24P1-201ENST00000433802 779 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC094019.1-201ENST00000434678 472 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN2BO60939 AL031681.1-201ENST00000443304 400 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AL512593.1-201ENST00000444758 779 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 RPL23AP60-201ENST00000450011 454 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.81□□□□□ -1.48
SCN2BO60939 RN7SL104P-201ENST00000498686 293 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN2BO60939 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.81□□□□□ -1.48
SCN2BO60939 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN2BO60939 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN2BO60939 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.81□□□□□ -1.48
SCN2BO60939 AL049779.3-201ENST00000557141 606 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN2BO60939 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.81□□□□□ -1.48
SCN2BO60939 AC025283.1-201ENST00000572039 734 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 MIR4433B-201ENST00000581329 102 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 AL360012.1-201ENST00000602813 131 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC008555.7-201ENST00000605008 583 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 RN7SL261P-201ENST00000613441 282 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AL031658.2-201ENST00000616850 651 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC241377.1-201ENST00000619797 406 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 AC211486.4-201ENST00000621495 113 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SCN2BO60939 AC024587.1-201ENST00000505925 2157 ntBASIC5.81□□□□□ -1.48
SCN2BO60939 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.81□□□□□ -1.48
SCN2BO60939 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SCN2BO60939 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms