Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC073136.2-201ENST00000417282 849 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 FTOP1-201ENST00000419363 861 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 OR5M12P-201ENST00000423388 929 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 HMGN2P24-201ENST00000433516 273 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC096775.1-201ENST00000437724 448 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC092569.1-201ENST00000455192 258 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 CYCSP34-201ENST00000458172 304 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 RN7SL854P-201ENST00000459767 295 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 RN7SL368P-201ENST00000473384 277 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC024022.1-201ENST00000503321 598 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC131392.1-201ENST00000506490 633 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC026774.2-201ENST00000513990 1098 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC103769.1-201ENST00000518507 283 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 WT1-AS-206ENST00000525436 1254 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC087280.1-201ENST00000530632 1003 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL352979.1-201ENST00000554238 297 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 MIR3972-201ENST00000582732 87 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC107990.1-201ENST00000590415 489 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 LINC00635-210ENST00000600240 714 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL137072.1-201ENST00000603444 466 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 RPL23AP90-201ENST00000603820 236 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 CAMKMT-210ENST00000613618 594 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 MIR8069-1-201ENST00000616627 86 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 MIR8069-2-201ENST00000621412 86 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC079331.1-201ENST00000623200 1200 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC106795.5-201ENST00000623288 454 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC211433.3-201ENST00000623770 375 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AP000648.2-201ENST00000624182 404 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC007224.2-201ENST00000625011 510 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 SALL4P2-201ENST00000423288 2910 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC079097.1-201ENST00000512187 1399 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 AL513523.1-201ENST00000417868 1309 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 AC007382.1-201ENST00000624376 2618 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 AP000542.2-201ENST00000623199 6179 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 NPY5R-201ENST00000338566 1843 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 IL6STP1-201ENST00000346911 1020 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 KRT18P52-201ENST00000404956 846 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 RNA5SP146-201ENST00000410743 123 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 AC017104.2-201ENST00000417000 321 ntBASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC2.99□□□□□ -1.93
LINC01558Q9Y6Z2 EIF4A1P1-201ENST00000420241 934 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms