Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC093014.1-201ENST00000548926 724 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 FAM106CP-201ENST00000582212 507 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC019131.2-201ENST00000609071 870 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC068726.1-201ENST00000610993 341 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 MIR6823-201ENST00000622118 61 ntBASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.4□□□□□ -1.22
COL4A3BPQ9Y5P4 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL4A3BPQ9Y5P4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 PARP4P1-201ENST00000435945 2337 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 HSPD1P7-201ENST00000447985 1686 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC130360.2-201ENST00000533477 1556 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 PSMC1P6-201ENST00000477233 1319 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 SNORA38B-201ENST00000363524 131 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 HSFY7P-201ENST00000432672 318 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC092106.2-201ENST00000436597 487 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 HSFY8P-201ENST00000437934 318 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC016908.1-201ENST00000442571 1219 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 HSFY5P-201ENST00000453726 309 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 NPM1P17-201ENST00000479221 602 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 AC005393.1-201ENST00000617916 584 ntBASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL4A3BPQ9Y5P4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 PPIAP24-201ENST00000328558 471 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AL391422.1-201ENST00000402155 436 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 AL133260.1-201ENST00000405720 405 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 RN7SKP188-201ENST00000410789 317 ntBASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.38□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms