Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 GAPDHP34-201ENST00000432112 823 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 GTF2IP14-201ENST00000441415 586 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 LIN28AP2-201ENST00000445283 458 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 RPL34P33-201ENST00000486062 334 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 RN7SL516P-201ENST00000496127 297 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC105391.1-201ENST00000503155 1045 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 RNA5SP116-201ENST00000516132 98 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 RBM22P12-201ENST00000567098 1255 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC005377.1-201ENST00000605126 456 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC022001.1-201ENST00000605193 268 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC096708.4-201ENST00000620563 552 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AP003485.2-201ENST00000623636 610 ntBASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM55Q9BYV6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
TRIM55Q9BYV6 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC007406.5-201ENST00000570140 3170 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL078621.1-201ENST00000272567 768 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 MIR142-201ENST00000384835 87 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PTMAP8-201ENST00000397729 342 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL021331.1-201ENST00000402817 582 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 TMA16P2-201ENST00000413187 601 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC096537.2-201ENST00000413707 714 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 MTND4P3-201ENST00000417829 541 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 VEZF1P1-201ENST00000423931 1541 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 FO393419.3-201ENST00000428741 282 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PTGES3P1-201ENST00000439531 483 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 PMS2P9-201ENST00000441237 515 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC104837.1-201ENST00000444644 1587 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 AC004022.1-201ENST00000447766 1066 ntBASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
TRIM55Q9BYV6 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms