Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC008626.2-201ENST00000624425 248 ntBASIC6.06□□□□□ -1.44
SNX18Q96RF0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 AC007012.2-201ENST00000623206 1676 ntBASIC6.06□□□□□ -1.44
SNX18Q96RF0 AP002800.1-201ENST00000624982 2225 ntBASIC6.06□□□□□ -1.44
SNX18Q96RF0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX18Q96RF0 AC011369.2-201ENST00000624423 1567 ntBASIC6.06□□□□□ -1.44
SNX18Q96RF0 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX18Q96RF0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AL136100.1-201ENST00000407696 330 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC007568.1-201ENST00000422912 471 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC239367.3-201ENST00000428996 814 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 RAB28P2-201ENST00000454299 641 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 RPSAP24-201ENST00000461543 873 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 RPS16P9-201ENST00000477220 427 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC090543.1-201ENST00000492168 485 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 RPL23AP80-201ENST00000495605 424 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 RPEP1-201ENST00000504507 658 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC098862.1-201ENST00000504991 413 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 RNU6-491P-201ENST00000516099 110 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC113191.1-201ENST00000517759 403 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 KCTD9P6-201ENST00000522306 950 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 OR4V1P-201ENST00000525394 1140 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC013244.3-201ENST00000605614 388 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC006946.3-201ENST00000609791 756 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC005156.1-201ENST00000613371 573 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC245407.2-201ENST00000614199 451 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC005899.6-201ENST00000620729 297 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AP003499.2-201ENST00000624100 483 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 AC135068.11-201ENST00000636378 921 ntBASIC6.05□□□□□ -1.44
SNX18Q96RF0 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.05□□□□□ -1.44
SNX18Q96RF0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNX18Q96RF0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AC140134.1-201ENST00000511830 3544 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.04□□□□□ -1.44
SNX18Q96RF0 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SNX18Q96RF0 RNU1-59P-201ENST00000364829 162 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 SNORD51.1-201ENST00000365405 77 ntBASIC6.04□□□□□ -1.44
SNX18Q96RF0 RNU6-609P-201ENST00000365459 107 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms