Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 UBBP5-201ENST00000446970 266 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL445991.1-201ENST00000450381 475 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 CCNJP1-201ENST00000450600 1149 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 RN7SL39P-201ENST00000462264 297 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 OR4A42P-201ENST00000531397 938 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 OR7M1P-201ENST00000608946 533 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 WBP1LP8-201ENST00000617401 327 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL590410.1-201ENST00000617925 333 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL162233.1-201ENST00000620014 944 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AP001264.1-201ENST00000620602 703 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AC080188.3-201ENST00000624842 748 ntBASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
CHMP4CQ96CF2 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CHMP4CQ96CF2 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AL355377.1-201ENST00000621125 1653 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 NDUFA5P1-201ENST00000433858 341 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 RNU6-467P-201ENST00000517027 110 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 OR8K2P-201ENST00000524645 927 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC009729.1-201ENST00000548873 1133 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 MTND2P17-201ENST00000550281 688 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 RN7SL208P-201ENST00000577964 296 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AL157899.1-201ENST00000604110 936 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC114477.1-201ENST00000605097 605 ntBASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.71□□□□□ -1.18
CHMP4CQ96CF2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 SMG1P5-202ENST00000529428 4219 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 SMG1P2-201ENST00000566127 4221 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 RNU1-84P-201ENST00000365447 164 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AP003170.5-201ENST00000397185 335 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AL589655.1-201ENST00000405398 482 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 EIF2S2P3-201ENST00000428356 999 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AL451063.1-201ENST00000450164 1133 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 RPL5P14-201ENST00000494197 878 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AC025283.1-201ENST00000572039 734 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AC092574.1-201ENST00000609771 420 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 MRPL57P1-201ENST00000621486 265 ntBASIC7.7□□□□□ -1.18
CHMP4CQ96CF2 AL122023.1-201ENST00000622847 530 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms