Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KYNUP3-201ENST00000574386 1341 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 RPL5P20-201ENST00000403848 896 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AL929472.1-201ENST00000417484 429 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 MTND1P10-201ENST00000426108 832 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC016027.5-201ENST00000427227 210 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 CHCHD4P5-201ENST00000436684 427 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 GAPDHP33-201ENST00000443168 1013 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 RPL5P14-201ENST00000494197 878 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC114940.1-201ENST00000512162 1265 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC093878.1-201ENST00000515630 432 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC011270.1-201ENST00000558606 583 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC107905.1-201ENST00000616204 426 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC126474.2-201ENST00000623268 1750 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.57□□□□□ -1.52
RFT1Q96AA3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 AC092692.1-201ENST00000623625 2595 ntBASIC5.57□□□□□ -1.52
RFT1Q96AA3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFT1Q96AA3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC068870.3-201ENST00000625077 2536 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL359955.1-201ENST00000455242 3275 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 RNA5SP478-201ENST00000364657 115 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 U3.43-201ENST00000410734 213 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL354868.1-201ENST00000417077 482 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC003989.1-201ENST00000434569 565 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC073072.2-201ENST00000447425 348 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC104849.1-201ENST00000462623 405 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 DEFB109A-201ENST00000482450 265 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 RN7SL37P-201ENST00000490461 307 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL035690.1-201ENST00000490892 383 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 SUMO2P4-201ENST00000504193 276 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC021146.10-201ENST00000515628 706 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 RNA5SP318-201ENST00000516352 92 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC008429.4-201ENST00000521201 182 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 RBMS2P1-201ENST00000525031 1226 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 NPM1P5-201ENST00000557228 838 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC010287.1-201ENST00000566916 357 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC091304.5-201ENST00000568969 158 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 MRPL45P2-203ENST00000573318 473 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 AP000919.1-201ENST00000582850 985 ntBASIC5.56□□□□□ -1.52
RFT1Q96AA3 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.56□□□□□ -1.52
RFT1Q96AA3 VN1R81P-201ENST00000602085 372 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms