Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AC034244.2-201ENST00000514668 858 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC117525.1-201ENST00000515228 503 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AC084337.1-201ENST00000524809 686 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC073916.1-201ENST00000545095 130 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC4Q92889 CD24P2-201ENST00000565486 219 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC091932.1-201ENST00000569381 427 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 RN7SL426P-201ENST00000579106 295 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AC135178.6-201ENST00000605314 398 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 SNORD96A-201ENST00000606577 79 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 PTCHD3P1-201ENST00000612350 537 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC009283.1-201ENST00000615852 645 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AP003108.4-201ENST00000623917 878 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 DNM1P47-203ENST00000571780 12667 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC4Q92889 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 CCNT2P1-201ENST00000423082 1315 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
ERCC4Q92889 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
ERCC4Q92889 RNA5SP188-201ENST00000362916 129 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 UBBP1-201ENST00000392399 473 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 EEF1GP6-201ENST00000402309 905 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 ZNF37CP-201ENST00000406795 241 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 RNU6-584P-201ENST00000410350 95 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC4Q92889 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AL592114.2-201ENST00000440142 532 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 RN7SL868P-201ENST00000485915 303 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 RPL5P14-201ENST00000494197 878 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 B3GNTL1P1-201ENST00000509174 289 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC4Q92889 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.34□□□□□ -1.23
ERCC4Q92889 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 AP003115.1-201ENST00000569849 463 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.34□□□□□ -1.23
ERCC4Q92889 RN7SL270P-201ENST00000579643 281 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AL158050.2-201ENST00000605336 568 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC024255.1-201ENST00000614376 102 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 AC117503.3-201ENST00000623811 601 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC4Q92889 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC4Q92889 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 AC007159.1-201ENST00000566529 4706 ntBASIC7.34□□□□□ -1.23
ERCC4Q92889 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC4Q92889 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.34□□□□□ -1.24
ERCC4Q92889 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
ERCC4Q92889 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
ERCC4Q92889 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC4Q92889 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC4Q92889 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC4Q92889 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC4Q92889 AC006511.3-201ENST00000624929 1783 ntBASIC7.33□□□□□ -1.24
ERCC4Q92889 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC7.33□□□□□ -1.24
ERCC4Q92889 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC4Q92889 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC4Q92889 AL512353.3-201ENST00000417517 1326 ntBASIC7.33□□□□□ -1.24
ERCC4Q92889 PSMC1P4-201ENST00000515236 1327 ntBASIC7.33□□□□□ -1.24
ERCC4Q92889 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms