Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 EEF1B2P8-201ENST00000414101 671 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 MTND4P11-201ENST00000417020 1058 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 SLAMF6P1-201ENST00000451067 602 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC009567.2-201ENST00000502989 349 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC018645.1-201ENST00000505003 109 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC118282.1-201ENST00000506408 765 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 RN7SL32P-201ENST00000580514 281 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 OR7E19P-202ENST00000589942 844 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AL589863.1-201ENST00000595383 631 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC018645.2-201ENST00000609151 472 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC026367.3-201ENST00000619032 590 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 AC022960.3-201ENST00000619794 441 ntBASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4AQ8WYN0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
ATG4AQ8WYN0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.52□□□□□ -1.36
ATG4AQ8WYN0 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC096921.2-201ENST00000561507 1916 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC010894.1-201ENST00000313760 361 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC092634.1-201ENST00000366505 199 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AL445238.1-204ENST00000400311 463 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 RN7SKP221-201ENST00000410420 301 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC073310.1-201ENST00000423226 1033 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AJ239321.1-201ENST00000424255 564 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AL589794.1-201ENST00000424971 390 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 GTF2IP14-201ENST00000441415 586 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 MORF4L1P4-201ENST00000450245 976 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 VPS25P1-201ENST00000455691 508 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 MTND2P30-201ENST00000456663 382 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 SCARNA1-201ENST00000517138 166 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 RNA5SP400-201ENST00000517155 111 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 MIR3159-201ENST00000584572 74 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AL512430.4-201ENST00000603085 613 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC012175.1-201ENST00000603755 531 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AL049777.1-201ENST00000622740 518 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AC069542.2-201ENST00000624816 216 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4AQ8WYN0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
ATG4AQ8WYN0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms