Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 SETP20-201ENST00000457046 852 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC098847.1-201ENST00000473094 348 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 OR7E99P-201ENST00000505750 922 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MTND1P36-201ENST00000522384 936 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC006518.1-201ENST00000541449 943 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC092375.1-201ENST00000550410 637 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL157831.2-201ENST00000564681 3095 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC007346.1-201ENST00000569208 867 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AP005136.2-201ENST00000583253 1049 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC008521.2-201ENST00000591021 259 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL049840.6-201ENST00000604583 345 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC108865.2-201ENST00000606881 432 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 SNORA74.4-201ENST00000607595 199 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC092266.1-201ENST00000610958 165 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL356752.1-201ENST00000615844 593 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 FAM27E2-201ENST00000619668 403 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL034408.1-201ENST00000637712 664 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 HSPD1P9-201ENST00000420325 1636 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 AL353743.3-201ENST00000442109 1468 ntBASIC6.46□□□□□ -1.38
HMGB4Q8WW32 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HMGB4Q8WW32 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 CASC19-228ENST00000641414 1684 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC092725.2-201ENST00000567658 1389 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC125238.2-201ENST00000430003 1440 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 Y_RNA.110-201ENST00000363220 99 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AL358178.1-201ENST00000407698 397 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 EEF1B2P8-201ENST00000414101 671 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 FAR1P1-201ENST00000427163 934 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 IGLV3-4-201ENST00000432300 244 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC003989.1-201ENST00000434569 565 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 MORF4L1P4-201ENST00000450245 976 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 RN7SL369P-201ENST00000477138 299 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC006499.4-201ENST00000510947 694 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 RNU6-1334P-201ENST00000516032 105 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 NPM1P52-201ENST00000518264 846 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 TRIM77BP-201ENST00000524985 1119 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC036111.2-201ENST00000533247 901 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC079905.1-201ENST00000549280 475 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AL157899.1-201ENST00000604110 936 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 AL080312.2-201ENST00000613001 630 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.45□□□□□ -1.38
HMGB4Q8WW32 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HMGB4Q8WW32 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms