Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN20P56880 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 AC011500.1-201ENST00000601963 469 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC011891.2-201ENST00000604949 397 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC012676.3-201ENST00000614983 479 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 MIR6085-201ENST00000618314 110 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 LINC02495-203ENST00000636704 242 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 AC027575.3-201ENST00000583058 2747 ntBASIC5.84□□□□□ -1.47
CLDN20P56880 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN20P56880 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN20P56880 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLDN20P56880 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.84□□□□□ -1.48
CLDN20P56880 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLDN20P56880 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC092724.1-201ENST00000624623 3397 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC022417.1-201ENST00000624768 1303 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC062022.1-201ENST00000451026 1684 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 SNORD35A-201ENST00000363389 86 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 RN7SKP250-201ENST00000363924 321 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 RNA5SP77-201ENST00000365394 120 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 YWHAZP4-201ENST00000392459 708 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC003045.1-201ENST00000398779 713 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC019070.1-201ENST00000415008 1024 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AL360013.1-201ENST00000419031 858 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 RPL23AP85-201ENST00000421838 433 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.83□□□□□ -1.48
CLDN20P56880 GTF3AP6-201ENST00000432585 986 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN20P56880 COX4I1P2-201ENST00000447446 547 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC009963.4-201ENST00000448535 339 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 OR52Y1P-201ENST00000452418 828 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 DEFB109A-201ENST00000482450 265 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC093816.1-201ENST00000515076 913 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC021146.10-201ENST00000515628 706 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 RN7SKP5-201ENST00000517045 272 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.83□□□□□ -1.48
CLDN20P56880 OR52K3P-201ENST00000531655 943 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC004232.2-201ENST00000574245 821 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN20P56880 AC003001.2-201ENST00000616294 831 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.83□□□□□ -1.48
CLDN20P56880 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 RPL31P11-201ENST00000426558 1558 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 AC010401.2-201ENST00000575137 4934 ntBASIC5.83□□□□□ -1.48
CLDN20P56880 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN20P56880 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLDN20P56880 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 AC092070.2-203ENST00000598377 3644 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLDN20P56880 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 SAGE3P-201ENST00000619800 1635 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 PRELID1P1-201ENST00000403549 660 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 RN7SKP281-201ENST00000410472 352 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AC013268.2-201ENST00000420753 337 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.82□□□□□ -1.48
CLDN20P56880 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN20P56880 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN20P56880 NPM1P25-201ENST00000429734 854 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 RPSAP32-201ENST00000432681 526 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AC003989.1-201ENST00000434569 565 ntBASIC5.82□□□□□ -1.48
CLDN20P56880 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms